You are querying gene by "AT5G04240".

Locus: AT5G04240 Alias: ELF6

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT5G04240 | Chromosome: 5 | Strand: +
ELF6( alias )
Gene model
AT5G04240.1 | From: 1169545 | To: 1174879
AT5G04240.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
transcription factor activity PMID: 11118137
intracellular PMID:
regulation of transcription PMID: 11118137
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT5G04240.1 
length: 4263 
miRNA : ath-miR780.1
length: 21 
mfe: -30.9 kcal/mol 
p-value: 0.014628 
position  1550 
target 5' C   G   C U            G 
miRNA  3'     A     U              
target: AT5G04240.1 
length: 4263 
miRNA : ath-miR837-5p
length: 21 
mfe: -26.4 kcal/mol 
p-value: 0.031179 
position  438 
target 5' A       U           C 
miRNA  3' A       U           A 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51681
NP_196044 ( AT5G04240 )Arabidopsis thaliana
estExt_fgenesh1_pg.C_1380108Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_420046Physcomitrella patens subsp. patens
28507.m000165Ricinus communis
NP_001045137Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM005451.5999988934925166E-151555IPR003349Transcription factor jumonji, JmjN
PROSITEPS511830.01657IPR003349Transcription factor jumonji, JmjN
PfamPF023756.60000000000002E-131750IPR003349Transcription factor jumonji, JmjN
SMARTSM005583.299990775033228E-45259428IPR003347Transcription factor jumonji/aspartyl beta-hydroxylase
PROSITEPS511840.0262428IPR003347Transcription factor jumonji/aspartyl beta-hydroxylase
PfamPF023731.4000000000000064E-34292411IPR013129Transcription factor jumonji
SMARTSM0035557.0000021701946912281250IPR015880Zinc finger, C2H2-like
SMARTSM003550.04899999517823594412511275IPR015880Zinc finger, C2H2-like
PROSITEPS501570.012511280IPR007087Zinc finger, C2H2-type
PROSITEPS000280.012531275IPR007087Zinc finger, C2H2-type
Gene3DG3DSA: finger, C2H2-type/integrase, DNA-binding
SMARTSM003550.002800000431182339412811305IPR015880Zinc finger, C2H2-like
PROSITEPS501570.012811310IPR007087Zinc finger, C2H2-type
PROSITEPS000280.012831305IPR007087Zinc finger, C2H2-type
SMARTSM003550.0949999985106437713111337IPR015880Zinc finger, C2H2-like
PROSITEPS501570.013111340IPR007087Zinc finger, C2H2-type
PROSITEPS000280.013131337IPR007087Zinc finger, C2H2-type