You are querying gene by "AT5G03730".

Locus: AT5G03730 Alias: CTR1

Hormone Evidence Function category Gene Description PMID
ethyleneMutant Hormone signal transduction Constitutive ethylene response.kinase activity;protein binding;protein serine/threonine kinase activity. 8431946 15980261 7768447
GeneOntology - negative regulation of ethylene mediated signaling pathway 12821658
auxinMutant Hormone biosynthesis and transport Constitutive ethylene response.kinase activity;protein binding;protein serine/threonine kinase activity. 19448626
abscisic acidMutant Hormone signal transduction encodes a Raf-like protein kinase. 10899977
gibberellinGeneOntology - gibberellin biosynthetic process 17389366

Basic gene information ( show / hide contents )

Locus AT5G03730 | Chromosome: 5 | Strand: -
Description encodes a Raf-like protein kinase.
Alias
CTR1( alias )
SIS1( alias )
Gene model
AT5G03730.2 | From: 974498 | To: 979848
AT5G03730.1 | From: 974507 | To: 979848
Sequence
AT5G03730.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT5G03730.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein serine/threonine/tyrosine kinase activity PMID: 16429265
protein binding PMID: 12535337
protein serine/threonine kinase activity PMID: 12535337
kinase activity PMID:
cellular_component
endoplasmic reticulum membrane PMID: 12821658
biological_process
negative regulation of ethylene mediated signaling pathway PMID: 12821658
response to ethylene stimulus PMID: 8431946
gibberellin biosynthetic process PMID: 17389366
sugar mediated signaling PMID: 12663220
response to sucrose stimulus PMID: 11162499
post-embryonic root development PMID: 17656722
regulation of timing of transition from vegetative to reproductive phase PMID: 17389366
stem cell division PMID: 17656722
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Signal transduction mechanisms protein-serine/threonine kinase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  ethylene     auxin     abscisic acid  

[   ethylene   ]

Genotype PMID Type
aux1-21 ctr1-1 7768447 mutant
ctr1 wei2 15980261 mutant
ctr1 wei7 15980261 mutant
ctr1-1 8431946 mutant
ctr1-1 ebf1-3 17307926 mutant
ctr1-1 ebf2-3 17307926 mutant
ctr1-1 ein3-2 7768447 mutant
ctr1-1 ein7 7768447 mutant
ctr1-1 eir1-1 7768447 mutant
ctr1-1 etr1-3 7768447 mutant
ctr1-1 hls1-1 7768447 mutant
ctr1-5 7768447 mutant
ctr1-5 ein2-1 7768447 mutant
ein3 ctr1 10381874 mutant
ein5 ctr1 16920797 mutant
etr1-3 ctr1-1 7768447 mutant
ctr1-2 8431946 mutant
ctr1-3 8431946 mutant
ctr1-4 8431946 mutant
ein5-1 ctr1-1 7768447 mutant
ctr1-1 ein4-1 7768447 mutant
ctr1-1 ein6 7768447 mutant
ctr1-1 ers1 7569898 mutant
eer1 ctr1-3 11161061 mutant
ctr1 mkk9 18273012 mutant
eer4 ctr1 17526916 mutant
abi1-1ctr1-10 10899977 mutant

[   auxin   ]

Genotype PMID Type
ctr1btk 19448626 mutant
ctr1-1 8431946 mutant
ctr2btk ctr1-1 19448626 mutant

[   abscisic acid   ]

Genotype PMID Type
abi1-1ctr1-10 10899977 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT5G03730.1 
length: 3105 
miRNA : ath-miR168a
length: 21 
 
mfe: -30.3 kcal/mol 
p-value: 0.030318 
 
position  760 
target 5' U    G  U          A   G 
           UUCU GA CCUGUACCGG CGA  
           AAGG CU GGACGUGGUU GCU  
miRNA  3'      G             C     
 
 
target: AT5G03730.1 
length: 3105 
miRNA : ath-miR168b
length: 21 
 
mfe: -30.3 kcal/mol 
p-value: 0.027372 
 
position  760 
target 5' U    G  U          A   G 
           UUCU GA CCUGUACCGG CGA  
           AAGG CU GGACGUGGUU GCU  
miRNA  3'      G             C     
 
 
target: AT5G03730.1 
length: 3105 
miRNA : ath-miR171b
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.006606 
 
position  1887 
target 5' C    C G G             A 
           CGUG U A UGGCAUGGCUCGG  
           GCAC A U ACCGUGCCGAGUU  
miRNA  3'      U   A               
 
 
target: AT5G03730.1 
length: 3105 
miRNA : ath-miR171c
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.007006 
 
position  1887 
target 5' C    C G G             A 
           CGUG U A UGGCAUGGCUCGG  
           GCAC A U ACCGUGCCGAGUU  
miRNA  3'      U   A               
 
 
target: AT5G03730.1 
length: 3105 
miRNA : ath-miR864-5p
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.015431 
 
position  1000 
target 5' C               G    U 
           UUGAAG CGAUCAUA UUGA  
           AACUUC GUUAGUAU GACU  
miRNA  3' A      A        G      
 
 
target: AT5G03730.2 
length: 2974 
miRNA : ath-miR168a
length: 21 
 
mfe: -30.3 kcal/mol 
p-value: 0.029047 
 
position  760 
target 5' U    G  U          A   G 
           UUCU GA CCUGUACCGG CGA  
           AAGG CU GGACGUGGUU GCU  
miRNA  3'      G             C     
 
 
target: AT5G03730.2 
length: 2974 
miRNA : ath-miR168b
length: 21 
 
mfe: -30.3 kcal/mol 
p-value: 0.026289 
 
position  760 
target 5' U    G  U          A   G 
           UUCU GA CCUGUACCGG CGA  
           AAGG CU GGACGUGGUU GCU  
miRNA  3'      G             C     
 
 
target: AT5G03730.2 
length: 2974 
miRNA : ath-miR171b
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.006273 
 
position  1887 
target 5' C    C G G             A 
           CGUG U A UGGCAUGGCUCGG  
           GCAC A U ACCGUGCCGAGUU  
miRNA  3'      U   A               
 
 
target: AT5G03730.2 
length: 2974 
miRNA : ath-miR171c
length: 21 
 
mfe: -29.3 kcal/mol 
p-value: 0.006658 
 
position  1887 
target 5' C    C G G             A 
           CGUG U A UGGCAUGGCUCGG  
           GCAC A U ACCGUGCCGAGUU  
miRNA  3'      U   A               
 
 
target: AT5G03730.2 
length: 2974 
miRNA : ath-miR864-5p
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.014592 
 
position  1000 
target 5' C               G    U 
           UUGAAG CGAUCAUA UUGA  
           AACUUC GUUAGUAU GACU  
miRNA  3' A      A        G      
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT5G03730AT3G20770negativemodification PN/AGO/others8431946
AT5G03730AT4G26080negativeotherN/Amutance16614222
AT5G03730AT5G03280negativeotherN/Amutance7768447

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_29664
AccessionTaxon
29092.m000453Ricinus communis
29908.m006279Ricinus communis
NP_194179Arabidopsis thaliana
NP_001053834Oryza sativa Japonica Group
29428.m000323Ricinus communis
NP_195993 ( AT5G03730 )Arabidopsis thaliana
NP_850760Arabidopsis thaliana
NP_001047004Oryza sativa Japonica Group
NP_001063956Oryza sativa Japonica Group
gw1.462.15.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561124.1e-83540819IPR011009Protein kinase-like domain
PfamPF077142.4e-72551804IPR001245Serine-threonine/tyrosine-protein kinase
SMARTSM002192.3e-74551805IPR020635Tyrosine-protein kinase, catalytic domain
SMARTSM002201.1e-67551809IPR002290Serine/threonine-protein kinase domain
PROSITEPS5001146.138551809IPR000719Protein kinase, catalytic domain
PROSITEPS00107NA557578IPR017441Protein kinase, ATP binding site
PROSITEPS00108NA672684IPR008271Serine/threonine-protein kinase, active site