You are querying gene by "AT4G39403".

Locus: AT4G39403 Alias: PLS

Hormone Evidence Function category Gene Description PMID
cytokininGeneOntology - response to cytokinin stimulus 0012172017
ethyleneGeneOntology - ethylene mediated signaling pathway 17138700
auxinGeneOntology - response to auxin stimulus 0012172017

Basic gene information ( show / hide contents )

Locus AT4G39403 | Chromosome: 4 | Strand: -
Description ethylene mediated signaling pathway
Alias
PLS( alias )
Gene model
AT4G39403.1 | From: 18329088 | To: 18329693
Sequence
AT4G39403.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
biological_process
xylem and phloem pattern formation PMID: 0012172017
response to auxin stimulus PMID: 0012172017
ethylene mediated signaling pathway PMID: 17138700
auxin homeostasis PMID: 17138700
root development PMID: 0012172017
adaxial/abaxial pattern formation PMID: 0012172017
auxin polar transport PMID: 17138700
response to cytokinin stimulus PMID: 0012172017
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G39403.1 
length: 606 
miRNA : ath-miR171b
length: 21 
 
mfe: -30.5 kcal/mol 
p-value: 0.000354 
 
position  367 
target 5' G             A U U    C 
           GUGAUGUUGGCGC G G CUCA  
           CACUAUAACCGUG C C GAGU  
miRNA  3' G                      U 
 
 
target: AT4G39403.1 
length: 606 
miRNA : ath-miR171c
length: 21 
 
mfe: -30.5 kcal/mol 
p-value: 0.000388 
 
position  367 
target 5' G             A U U    C 
           GUGAUGUUGGCGC G G CUCA  
           CACUAUAACCGUG C C GAGU  
miRNA  3' G                      U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G39403AT3G48100negativeotherN/Amolecular12172017
AT4G39403AT4G14560PositiveotherN/Amolecular12172017

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

No related Cross Link information for this gene.