You are querying gene by "AT4G37760".

Locus: AT4G37760 Alias: SQE3

Hormone Evidence Function category Gene Description PMID
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16021335

Basic gene information ( show / hide contents )

Locus AT4G37760 | Chromosome: 4 | Strand: +
Description response to jasmonic acid stimulus
Alias
SQE3( alias )
Gene model
AT4G37760.1 | From: 17743881 | To: 17746672
Sequence
AT4G37760.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
oxidoreductase activity PMID:
cellular_component
endomembrane system PMID:
biological_process
response to wounding PMID: 16021335
sterol biosynthetic process PMID: 10350086
response to jasmonic acid stimulus PMID: 16021335
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Biosynthesis of steroids squalene monooxygenase
Terpenoid biosynthesis squalene monooxygenase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G37760.1 
length: 2028 
miRNA : ath-miR864-5p
length: 21 
 
mfe: -23.4 kcal/mol 
p-value: 0.032917 
 
position  507 
target 5' C             A   C  G 
           UUGAAGUUAAUCG ACU GG  
           AACUUCAGUUAGU UGG CU  
miRNA  3' A             A   A    
 
 
target: AT4G37760.1 
length: 2028 
miRNA : ath-miR869.2
length: 21 
 
mfe: -27.2 kcal/mol 
p-value: 0.013661 
 
position  1471 
target 5' U              C     G 
           UCGAUUAUCUUAGC UCGGA  
           AGUUGAUAGAGUUG GGUCU  
miRNA  3' C              U       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_13490
AccessionTaxon
NP_179868Arabidopsis thaliana
NP_564734Arabidopsis thaliana
NP_568033 ( AT4G37760 )Arabidopsis thaliana
NP_001049462Oryza sativa Japonica Group
NP_001049463Oryza sativa Japonica Group
estExt_fgenesh1_pm.C_Chr_08.00010038Ostreococcus tauri
estExt_Genewise1.C_3000031Physcomitrella patens subsp. patens
29212.m000176Ricinus communis
29825.m000332Ricinus communis
30074.m001343Ricinus communis
30099.m001668Ricinus communis
30170.m013663Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF008900.0825685IPR003953Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal
PfamPF084915.20000000000001E-119205475IPR013698Squalene epoxidase