You are querying gene by "AT4G37580".

Locus: AT4G37580 Alias: COP3

Hormone Evidence Function category Gene Description PMID
ethyleneMutant Hormone response Hookless1;N-acetyltransferase activity;ethylene response gene,essential for differential cell elongation in hypocotyl. 8612271 7768447
GeneOntology - response to ethylene stimulus 7768447
auxinGeneOntology - auxin mediated signaling pathway 8612271

Basic gene information ( show / hide contents )

Locus AT4G37580 | Chromosome: 4 | Strand: +
Description Hookless1;N-acetyltransferase activity;ethylene response gene,essential for differential cell elongation in hypocotyl.
Alias
COP3( alias )
HLS1( alias )
UNS2( alias )
Gene model
AT4G37580.1 | From: 17658606 | To: 17660869
Sequence
AT4G37580.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
N-acetyltransferase activity PMID: 8612271
cellular_component
cellular_component_unknown PMID:
biological_process
unidimensional cell growth PMID: 8612271
metabolic process PMID:
auxin mediated signaling pathway PMID: 8612271
photomorphogenesis PMID: 0012271066
response to ethylene stimulus PMID: 7768447
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   ethylene   ]

Genotype PMID Type
ctr1-1 hls1-1 7768447 mutant
ein2-1 hls1-1 7768447 mutant
eir1-1 hls1-1 7768447 mutant
hls1-1 8612271 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G37580.1 
length: 1846 
miRNA : ath-miR415
length: 21 
 
mfe: -23.6 kcal/mol 
p-value: 0.011848 
 
position  1664 
target 5' U                    U 
           UGUUUUG UUUUGUUUUGUU  
           ACAAGAC AAGACGAGACAA  
miRNA  3' U       A              
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G37580AT1G66340negativeotherN/Amutance8612271
AT4G37580AT2G39940negativeotherN/Amutance8612271
AT4G37580AT2G40940negativeotherN/Amutance8612271
AT4G37580AT3G04580negativeotherN/Amutance8612271
AT4G37580AT3G23150negativeotherN/Amutance8612271
AT4G37580AT5G62000negativeotherN/Amolecular15296176

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_40630
AccessionTaxon
NP_001031403Arabidopsis thaliana
NP_179888Arabidopsis thaliana
NP_195474 ( AT4G37580 )Arabidopsis thaliana
NP_001051365Oryza sativa Japonica Group
e_gw1.324.35.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_200112Physcomitrella patens subsp. patens
29661.m000906Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF557295.8E-151163IPR016181Acyl-CoA N-acyltransferase
PROSITEPS511860.02177IPR000182GCN5-related N-acetyltransferase
Gene3DG3DSA:3.40.630.302.000000752174556E-718171IPR016181Acyl-CoA N-acyltransferase
PfamPF005837.799999999999993E-1366158IPR022610GCN5-related N-acetyltransferase, C-terminal