You are querying gene by "AT4G37390".

Locus: AT4G37390 Alias: AUR3

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone metabolism 14756757
GeneOntology - response to auxin stimulus 15659623

Basic gene information ( show / hide contents )

Locus AT4G37390 | Chromosome: 4 | Strand: +
Description
Alias
AUR3( alias )
BRU6( alias )
GH3-2( alias )
GH3.2( alias )
YDK1( alias )
Gene model
AT4G37390.1 | From: 17579653 | To: 17582016
Sequence
AT4G37390.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
indole-3-acetic acid amido synthetase PMID: 15659623
biological_process
response to auxin stimulus PMID: 15659623
auxin homeostasis PMID: 15659623
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
ydk1-D 14756757 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G37390.1 
length: 2131 
miRNA : ath-miR170
length: 21 
 
mfe: -24.6 kcal/mol 
p-value: 0.036605 
 
position  223 
target 5' A    C   A           U 
           AUAU UGA ACGGUUCGAUC  
           UAUA ACU UGCCGAGUUAG  
miRNA  3' C        G           U 
 
 
target: AT4G37390.1 
length: 2131 
miRNA : ath-miR776
length: 21 
 
mfe: -23.6 kcal/mol 
p-value: 0.029097 
 
position  424 
target 5' C   A                  C 
           AAC AUUGA AGAAGACUUAGA  
           UUG UAGUU UCUUCUGAAUCU  
miRNA  3'           A              
 
 
target: AT4G37390.1 
length: 2131 
miRNA : ath-miR830*
length: 22 
 
mfe: -24.1 kcal/mol 
p-value: 0.008779 
 
position  1597 
target 5' U    A  U            U   G 
           GGCU AG GCUGUUUGGAGA GGA  
           UUGG UU UGAUAAACCUCU UCU  
miRNA  3'      A                     
 
 
target: AT4G37390.1 
length: 2131 
miRNA : ath-miR856
length: 22 
 
mfe: -24.8 kcal/mol 
p-value: 0.003224 
 
position  911 
target 5' G         U     U      U 
           GCUG AGUU UUGGU GGGGUU  
           CGAC UCAA AACCA UCCUAA  
miRNA  3'      U    U            U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G37390IAAnegativeotherN/Amutance14756757

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14809
AccessionTaxon
NP_001031874Arabidopsis thaliana
NP_174134Arabidopsis thaliana
NP_196839Arabidopsis thaliana
NP_196840Arabidopsis thaliana
NP_196841Arabidopsis thaliana
NP_196842Arabidopsis thaliana
NP_001044345Oryza sativa Japonica Group
NP_001044467Oryza sativa Japonica Group
NP_001055967Oryza sativa Japonica Group
NP_001060084Oryza sativa Japonica Group
NP_001060085Oryza sativa Japonica Group
NP_001060163Oryza sativa Japonica Group
27533.m000079Ricinus communis
28152.m000872Ricinus communis
29970.m001008Ricinus communis
30128.m008575Ricinus communis
30129.m000366Ricinus communis
NP_173729Arabidopsis thaliana
NP_175299Arabidopsis thaliana
NP_196836Arabidopsis thaliana
NP_199960Arabidopsis thaliana
NP_176159Arabidopsis thaliana
NP_179101Arabidopsis thaliana
NP_179898Arabidopsis thaliana
NP_182296Arabidopsis thaliana
NP_194456Arabidopsis thaliana
NP_195455 ( AT4G37390 )Arabidopsis thaliana
NP_200262Arabidopsis thaliana
NP_849718Arabidopsis thaliana
estExt_Genewise1.C_3230045Physcomitrella patens subsp. patens
NP_175300Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF033215.7e-21122578IPR004993GH3 auxin-responsive promoter