You are querying gene by "AT4G36760".

Locus: AT4G36760 Alias: APP1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport 11891249

Basic gene information ( show / hide contents )

Locus AT4G36760 | Chromosome: 4 | Strand: +
Description auxin polar transport
Alias
APP1( alias )
ATAPP1( alias )
Gene model
AT4G36760.1 | From: 17326622 | To: 17330214
AT4G36760.2 | From: 17326638 | To: 17330214
Sequence
AT4G36760.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G36760.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
tyrosine aminopeptidase activity PMID: 11891249
N-1-naphthylphthalamic acid binding PMID: 11891249
cellular_component
plasma membrane PMID: 11891249
biological_process
auxin polar transport PMID: 11891249
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G36760.1 
length: 2238 
miRNA : ath-miR1886.1
length: 21 
 
mfe: -23.3 kcal/mol 
p-value: 0.054775 
 
position  626 
target 5' U     G   A     G     G 
           GGUUU GUC UCGCU CUCUU  
           CUAAA UAG AGUGA GAGAG  
miRNA  3'       G         A     U 
 
 
target: AT4G36760.1 
length: 2238 
miRNA : ath-miR405a
length: 24 
 
mfe: -32.3 kcal/mol 
p-value: 0.001675 
 
position  942 
target 5' C                 U  U    G 
           GGUUAUGGG UGGAUCC GC UCGU  
           UCAAUACCC AUCUGGG UG AGUA  
miRNA  3'           A       U         
 
 
target: AT4G36760.1 
length: 2238 
miRNA : ath-miR405b
length: 24 
 
mfe: -32.3 kcal/mol 
p-value: 0.001848 
 
position  942 
target 5' C                 U  U    G 
           GGUUAUGGG UGGAUCC GC UCGU  
           UCAAUACCC AUCUGGG UG AGUA  
miRNA  3'           A       U         
 
 
target: AT4G36760.1 
length: 2238 
miRNA : ath-miR405d
length: 24 
 
mfe: -32.3 kcal/mol 
p-value: 0.002402 
 
position  942 
target 5' C                 U  U    G 
           GGUUAUGGG UGGAUCC GC UCGU  
           UCAAUACCC AUCUGGG UG AGUA  
miRNA  3'           A       U         
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10729
AccessionTaxon
NP_001059149Oryza sativa Japonica Group
NP_187186Arabidopsis thaliana
104657Chlamydomonas reinhardtii
e_gw1.13.00.50.1Ostreococcus tauri
estExt_Genewise1.C_4020014Physcomitrella patens subsp. patens
30128.m008778Ricinus communis
NP_195394 ( AT4G36760 )Arabidopsis thaliana
NP_001068036Oryza sativa Japonica Group
NP_001068038Oryza sativa Japonica Group
e_gw1.96.22.1Physcomitrella patens subsp. patens
29646.m001064Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR108042.1e-2065423IPR000994Peptidase M24, structural domain
PfamPF013211.4e-165139IPR000587Creatinase
Gene3DG3DSA:3.90.230.105.9e-48324575IPR000994Peptidase M24, structural domain
SuperFamilySSF559202.5e-50327609IPR000994Peptidase M24, structural domain
PfamPF005573.6e-39381569IPR000994Peptidase M24, structural domain
PROSITEPS00491NA510522IPR001131Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site