You are querying gene by "AT4G36740".

Locus: AT4G36740 Alias: ATHB40

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 15567172

Basic gene information ( show / hide contents )

Locus AT4G36740 | Chromosome: 4 | Strand: -
Description response to auxin stimulus
Alias
ATHB40( alias )
HB-5( alias )
Gene model
AT4G36740.1 | From: 17314563 | To: 17316378
Sequence
AT4G36740.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID:
biological_process
response to auxin stimulus PMID: 15567172
regulation of transcription, DNA-dependent PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G36740.1 
length: 801 
miRNA : ath-miR414
length: 21 
 
mfe: -25.1 kcal/mol 
p-value: 0.003286 
 
position  615 
target 5' A U   A        C     C 
           G CGG GAUGAUGG GAUGA  
           C GCU CUACUACU CUACU  
miRNA  3' A U   A        U       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_49541
AccessionTaxon
NP_001049280Oryza sativa Japonica Group
NP_179445Arabidopsis thaliana
NP_195392 ( AT4G36740 )Arabidopsis thaliana
NP_001060106Oryza sativa Japonica Group
29646.m001066Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF466891.4e-1741116IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.6e-1442115IPR012287Homeodomain-related
PROSITEPS5007116.68250110IPR001356Homeobox
SMARTSM003891e-1953114IPR001356Homeobox
PfamPF000468.8e-1856109IPR001356Homeobox
PRINTSPR000319.2e-068190IPR000047Helix-turn-helix motif, lambda-like repressor
PROSITEPS00027NA85108IPR017970Homeobox, conserved site
PRINTSPR000319.2e-0690106IPR000047Helix-turn-helix motif, lambda-like repressor