You are querying gene by "AT4G35390".

Locus: AT4G35390 Alias: AGF1

Hormone Evidence Function category Gene Description PMID
gibberellinGeneOntology - negative regulation of gibberellic acid mediated signaling 17277098

Basic gene information ( show / hide contents )

Locus AT4G35390 | Chromosome: 4 | Strand: +
Description negative regulation of gibberellic acid mediated signaling
Alias
AGF1( alias )
Gene model
AT4G35390.1 | From: 16829331 | To: 16830697
Sequence
AT4G35390.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
transcription factor activity PMID: 17277098
cellular_component
nucleus PMID: 17277098
biological_process
negative regulation of gibberellic acid mediated signaling PMID: 17277098
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G35390.1 
length: 1367 
miRNA : ath-miR160a
length: 21 
 
mfe: -35.1 kcal/mol 
p-value: 0.001195 
 
position  993 
target 5' A              G    C 
           GGU UACGGGGAGU GGGC  
           CCG AUGUCCCUCG UCCG  
miRNA  3' A   U          G    U 
 
 
target: AT4G35390.1 
length: 1367 
miRNA : ath-miR160b
length: 21 
 
mfe: -35.1 kcal/mol 
p-value: 0.001379 
 
position  993 
target 5' A              G    C 
           GGU UACGGGGAGU GGGC  
           CCG AUGUCCCUCG UCCG  
miRNA  3' A   U          G    U 
 
 
target: AT4G35390.1 
length: 1367 
miRNA : ath-miR160c
length: 21 
 
mfe: -35.1 kcal/mol 
p-value: 0.002352 
 
position  993 
target 5' A              G    C 
           GGU UACGGGGAGU GGGC  
           CCG AUGUCCCUCG UCCG  
miRNA  3' A   U          G    U 
 
 
target: AT4G35390.1 
length: 1367 
miRNA : ath-miR408
length: 21 
 
mfe: -30.8 kcal/mol 
p-value: 0.005393 
 
position  1132 
target 5' C G   C             G  G 
           G UAG GGAGGAGGUGGUG CG  
           C GUC CCUUCUCCGUCAC GU  
miRNA  3'   G                    A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51311
AccessionTaxon
NP_173514Arabidopsis thaliana
NP_177776Arabidopsis thaliana
NP_001047914Oryza sativa Japonica Group
NP_195265 ( AT4G35390 )Arabidopsis thaliana
30170.m014241Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0160210.01299IPR014476Predicted AT-hook DNA-binding
PfamPF034791.9000000000000046E-3591208IPR005175Protein of unknown function DUF296