You are querying gene by "AT4G34000".

Locus: AT4G34000 Alias: ABF3

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16463099

Basic gene information ( show / hide contents )

Locus AT4G34000 | Chromosome: 4 | Strand: +
Description response to abscisic acid stimulus
Alias
ABF3( alias )
DPBF5( alias )
Gene model
AT4G34000.1 | From: 16295563 | To: 16298260
AT4G34000.2 | From: 16295435 | To: 16298260
AT4G34000.3 | From: 16295563 | To: 16298237
Sequence
AT4G34000.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G34000.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G34000.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
protein binding PMID: 16299177
transcription factor activity PMID: 10760247
transcription activator activity PMID: 10636868
cellular_component
nucleus PMID:
biological_process
abscisic acid mediated signaling PMID: 11884679
response to water deprivation PMID: 16463099
regulation of transcription, DNA-dependent PMID: 11019812
response to salt stress PMID: 16463099
response to stress PMID: 10636868
response to abscisic acid stimulus PMID: 16463099
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G34000.1 
length: 1985 
miRNA : ath-miR776
length: 21 
 
mfe: -23.5 kcal/mol 
p-value: 0.028082 
 
position  951 
target 5' U    G         U      A 
           GGCA UAAUGGAGG CUUGGG  
           UUGU GUUAUCUUC GAAUCU  
miRNA  3'      A         U        
 
 
target: AT4G34000.1 
length: 1985 
miRNA : ath-miR778
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.018731 
 
position  371 
target 5' A       A      A C     A 
           UGGUGUG GUGAGC G AGCCA  
           GCCACAU UAUUUG U UCGGU  
miRNA  3'         G      G         
 
 
target: AT4G34000.2 
length: 1737 
miRNA : ath-miR776
length: 21 
 
mfe: -23.5 kcal/mol 
p-value: 0.023260 
 
position  703 
target 5' U    G         U      A 
           GGCA UAAUGGAGG CUUGGG  
           UUGU GUUAUCUUC GAAUCU  
miRNA  3'      A         U        
 
 
target: AT4G34000.2 
length: 1737 
miRNA : ath-miR778
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.016066 
 
position  123 
target 5' A       A      A C     A 
           UGGUGUG GUGAGC G AGCCA  
           GCCACAU UAUUUG U UCGGU  
miRNA  3'         G      G         
 
 
target: AT4G34000.3 
length: 1815 
miRNA : ath-miR776
length: 21 
 
mfe: -23.5 kcal/mol 
p-value: 0.024762 
 
position  702 
target 5' U    G         U      A 
           GGCA UAAUGGAGG CUUGGG  
           UUGU GUUAUCUUC GAAUCU  
miRNA  3'      A         U        
 
 
target: AT4G34000.3 
length: 1815 
miRNA : ath-miR778
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.016906 
 
position  122 
target 5' A       A      A C     A 
           UGGUGUG GUGAGC G AGCCA  
           GCCACAU UAUUUG U UCGGU  
miRNA  3'         G      G         
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G34000ABRESPositivetransciptN/AGO/othersN/A
AT4G34000AT1G20440PositivetransciptN/AGO/othersN/A
AT4G34000AT2G38050PositivetransciptN/AGO/othersN/A
AT4G34000AT3G23050PositivetransciptN/AGO/othersN/A
AT4G34000AT3G63210PositivetransciptN/AGO/othersN/A

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69418
AccessionTaxon
NP_001031785Arabidopsis thaliana
NP_567949 ( AT4G34000 )Arabidopsis thaliana
NP_849490Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM003381.499999775833517E-10370430IPR004827Basic-leucine zipper (bZIP) transcription factor
SMARTSM003389.4e-14370435IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS502170.0372429IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS5021710.473372417IPR004827Basic-leucine zipper (bZIP) transcription factor
PfamPF001704.500000000000003E-9374418IPR011616bZIP transcription factor, bZIP-1
PfamPF001701e-11374423IPR011616bZIP transcription factor, bZIP-1
PROSITEPS000360.0377392IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS00036NA377392IPR004827Basic-leucine zipper (bZIP) transcription factor