You are querying gene by "AT4G33090".

Locus: AT4G33090 Alias: APM1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport 11891249

Basic gene information ( show / hide contents )

Locus AT4G33090 | Chromosome: 4 | Strand: -
Description auxin polar transport
Alias
APM1( alias )
ATAPM1( alias )
Gene model
AT4G33090.1 | From: 15965744 | To: 15970459
Sequence
AT4G33090.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
tyrosine aminopeptidase activity PMID: 11891249
cellular_component
plasma membrane PMID: 11891249
biological_process
auxin polar transport PMID: 11891249
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other amino acid metabolism aminopeptidase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G33090.1 
length: 2852 
miRNA : ath-miR397b
length: 21 
 
mfe: -26.3 kcal/mol 
p-value: 0.017152 
 
position  2349 
target 5' A               U    A 
           AUCAA GAUGCACUU AUGG  
           UAGUU CUACGUGAG UACU  
miRNA  3' G     G         U      
 
 
target: AT4G33090.1 
length: 2852 
miRNA : ath-miR407
length: 21 
 
mfe: -20.0 kcal/mol 
p-value: 0.028106 
 
position  1564 
target 5' A   U    C            G 
           AUC GGAG GUAUGAUUUAAA  
           UGG UUUC UAUACUAAAUUU  
miRNA  3'     U    A              
 
 
target: AT4G33090.1 
length: 2852 
miRNA : ath-miR781
length: 21 
 
mfe: -23.3 kcal/mol 
p-value: 0.106313 
 
position  1351 
target 5' C                   U 
           GGG AUCCGGAGAAC CUG  
           UUC UAGGUCUUUUG GAU  
miRNA  3' A   A           A   U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10704
AccessionTaxon
NP_195035 ( AT4G33090 )Arabidopsis thaliana
NP_001046303Oryza sativa Japonica Group
NP_001061746Oryza sativa Japonica Group
NP_001062986Oryza sativa Japonica Group
NP_001062987Oryza sativa Japonica Group
estExt_Genewise1.C_2920035Physcomitrella patens subsp. patens
29739.m003583Ricinus communis
NP_001062988Oryza sativa Japonica Group
166144Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF014330.010395IPR014782Peptidase M1, membrane alanine aminopeptidase, N-terminal
PANTHERPTHR115330.0107875IPR001930Peptidase M1, membrane alanine aminopeptidase
PANTHERPTHR11533:SF330.0107875IPR015568Peptidase M1, puromycin-sensitive aminopeptidase
PRINTSPR007562.60000517657733E-29143158IPR014782Peptidase M1, membrane alanine aminopeptidase, N-terminal
PRINTSPR007562.60000517657733E-29190205IPR014782Peptidase M1, membrane alanine aminopeptidase, N-terminal
PRINTSPR007562.60000517657733E-29268278IPR014782Peptidase M1, membrane alanine aminopeptidase, N-terminal
PRINTSPR007562.60000517657733E-29304319IPR014782Peptidase M1, membrane alanine aminopeptidase, N-terminal
PRINTSPR007562.60000517657733E-29323335IPR014782Peptidase M1, membrane alanine aminopeptidase, N-terminal