You are querying gene by "AT4G32980".

Locus: AT4G32980 Alias: ATH1

Hormone Evidence Function category Gene Description PMID
gibberellinGeneOntology - gibberellin biosynthetic process 11986761

Basic gene information ( show / hide contents )

Locus AT4G32980 | Chromosome: 4 | Strand: -
Description gibberellin biosynthetic process
Alias
ATH1( alias )
Gene model
AT4G32980.1 | From: 15914725 | To: 15918047
Sequence
AT4G32980.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 7696878
transcription factor activity PMID: 7696878
cellular_component
nucleus PMID:
biological_process
photomorphogenesis PMID: 7696878
vegetative to reproductive phase transition PMID: 17908157
gibberellin biosynthetic process PMID: 11986761
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G32980.1 
length: 2268 
miRNA : ath-miR827
length: 21 
 
mfe: -23.9 kcal/mol 
p-value: 0.010312 
 
position  1445 
target 5' G     C        G  U    U 
           AGUUU UUGAUGGU AU CUAA  
           UCAAA AACUACCA UA GAUU  
miRNA  3'       C        G         
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_58880
AccessionTaxon
NP_195024 ( AT4G32980 )Arabidopsis thaliana
NP_001046346Oryza sativa Japonica Group
NP_001057875Oryza sativa Japonica Group
29794.m003336Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM005743.1000130737020646E-64196334IPR006563POX
PfamPF075268.30000000000004E-27201333IPR006563POX
PROSITEPS500710.0370433IPR001356Homeobox
Gene3DG3DSA:1.10.10.604.099995990457497E-24371453IPR012287Homeodomain-related
SuperFamilySSF466893.8E-15371448IPR009057Homeodomain-like
SMARTSM003892.1000003726265565E-5373437IPR001356Homeobox
PfamPF000460.004399999999999999391429IPR001356Homeobox