You are querying gene by "AT4G32880".

Locus: AT4G32880 Alias: ATHB-8

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 8575317

Basic gene information ( show / hide contents )

Locus AT4G32880 | Chromosome: 4 | Strand: -
Description response to auxin stimulus
Alias
ATHB-8( alias )
ATHB8( alias )
Gene model
AT4G32880.1 | From: 15863456 | To: 15868629
Sequence
AT4G32880.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID:
biological_process
meristem initiation PMID: 15598805
xylem histogenesis PMID: 11402194
response to auxin stimulus PMID: 8575317
primary shoot apical meristem specification PMID: 15598805
regulation of transcription, DNA-dependent PMID:
positive regulation of cell differentiation PMID: 11402194
positive regulation of cell proliferation PMID: 11402194
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G32880.1 
length: 3023 
miRNA : ath-miR838
length: 21 
 
mfe: -27.6 kcal/mol 
p-value: 0.008735 
 
position  2040 
target 5' A       U        U     C 
           UGUGCAG GGGGUGGA GAGAA  
           ACACGUU CUUCAUCU CUUUU  
miRNA  3'                  U       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_19552
AccessionTaxon
NP_001077702Arabidopsis thaliana
NP_174337Arabidopsis thaliana
NP_175627Arabidopsis thaliana
NP_181018Arabidopsis thaliana
NP_195014 ( AT4G32880 )Arabidopsis thaliana
NP_200877Arabidopsis thaliana
NP_849795Arabidopsis thaliana
NP_001048707Oryza sativa Japonica Group
NP_001050745Oryza sativa Japonica Group
NP_001064873Oryza sativa Japonica Group
NP_001067260Oryza sativa Japonica Group
e_gw1.15.340.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1880070Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_550053Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_670048Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_700130Physcomitrella patens subsp. patens
27538.m000332Ricinus communis
29794.m003393Ricinus communis
30075.m001183Ricinus communis
30146.m003520Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:1.10.10.607.800000169384094E-10179IPR012287Homeodomain-related
SuperFamilySSF466899.3E-16385IPR009057Homeodomain-like
PROSITEPS500710.01074IPR001356Homeobox
SMARTSM003891.2000011745813377E-151278IPR001356Homeobox
PfamPF000462.2000000000000038E-131573IPR001356Homeobox
SMARTSM003380.2699999983002970357114IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS508480.0150378IPR002913Lipid-binding START
SMARTSM002342.1999990098070712E-42159369IPR002913Lipid-binding START
PfamPF018522.2999999999999848E-54160368IPR002913Lipid-binding START
PfamPF086705.5999999999999945E-58687833IPR013978MEKHLA