You are querying gene by "AT4G32810".

Locus: AT4G32810 Alias: CCD8

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 12815068

Basic gene information ( show / hide contents )

Locus AT4G32810 | Chromosome: 4 | Strand: +
Description response to auxin stimulus
Alias
CCD8( alias )
MAX4( alias )
Gene model
AT4G32810.1 | From: 15828232 | To: 15831489
Sequence
AT4G32810.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen PMID: 12815068
cellular_component
chloroplast stroma PMID: 16507088
chloroplast PMID:
biological_process
secondary shoot formation PMID: 16507088
response to auxin stimulus PMID: 12815068
auxin polar transport PMID: 16546078
xanthophyll catabolic process PMID: 16507088
leaf morphogenesis PMID: 16507088
carotene catabolic process PMID: 16507088
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G32810.1 
length: 2019 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -24.1 kcal/mol 
p-value: 0.039786 
 
position  819 
target 5' A       U       U    G 
           GAGACGA CGGGAAA UUGA  
           CUUUGCU GUUCUUU GACU  
miRNA  3' A       U            A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12180
AccessionTaxon
NP_195007 ( AT4G32810 )Arabidopsis thaliana
141185Chlamydomonas reinhardtii
NP_001043363Oryza sativa Japonica Group
NP_001044229Oryza sativa Japonica Group
e_gw1.14.69.1Physcomitrella patens subsp. patens
29794.m003382Ricinus communis
141186Chlamydomonas reinhardtii
0100010184Ostreococcus tauri
0100010438Ostreococcus tauri
175612Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR105430.040570IPR004294Carotenoid oxygenase
PfamPF030553.1000000000000524E-10982569IPR004294Carotenoid oxygenase