You are querying gene by "AT4G32040".

Locus: AT4G32040 Alias: KNAT5

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - detection of ethylene stimulus 16463096

Basic gene information ( show / hide contents )

Locus AT4G32040 | Chromosome: 4 | Strand: +
Description detection of ethylene stimulus
Alias
KNAT5( alias )
Gene model
AT4G32040.1 | From: 15494071 | To: 15496362
Sequence
AT4G32040.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription activator activity PMID: 8980519
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 16463096
biological_process
detection of ethylene stimulus PMID: 16463096
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G32040.1 
length: 1561 
miRNA : ath-miR1886.3
length: 21 
 
mfe: -21.6 kcal/mol 
p-value: 0.011957 
 
position  867 
target 5' G  A                 G 
           AG GAGA GAGAUCUUUGAU  
           UC UUCU CUUUAGAAAUUA  
miRNA  3'    A    A            A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF037909.700000000000004E-15117159IPR005540KNOX1
PfamPF037911.3000000000000008E-18169222IPR005541KNOX2
Gene3DG3DSA:1.10.10.604.0000030086991576E-19277363IPR012287Homeodomain-related
PfamPF037890.0019000000000000002281302IPR005539ELK
PROSITEPS512130.0281301IPR005539ELK
PROSITEPS500710.0301364IPR001356Homeobox
SuperFamilySSF466892.7E-14302379IPR009057Homeodomain-like
SMARTSM003892.7999988940411397E-10303368IPR001356Homeobox
PfamPF000460.016327360IPR001356Homeobox