You are querying gene by "AT4G31800".

Locus: AT4G31800 Alias: WRKY18

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction transcription factor 17096590
GeneOntology - response to salicylic acid stimulus 12602888

Basic gene information ( show / hide contents )

Locus AT4G31800 | Chromosome: 4 | Strand: +
Description transcription factor
Alias
WRKY18( alias )
Gene model
AT4G31800.1 | From: 15383207 | To: 15385035
AT4G31800.2 | From: 15383207 | To: 15385035
Sequence
AT4G31800.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G31800.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 17096590
cellular_component
nucleus PMID: 16603654
biological_process
response to salicylic acid stimulus PMID: 12602888
defense response to fungus PMID: 16603654
regulation of transcription, DNA-dependent PMID:
regulation of defense response PMID: 12068113
regulation of defense response to virus by host PMID: 17185563
defense response to bacterium PMID: 12602888
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
wrky18 17096590 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G31800.1 
length: 1245 
miRNA : ath-miR781
length: 21 
 
mfe: -22.0 kcal/mol 
p-value: 0.081449 
 
position  1148 
target 5' A         G            A 
           UAAGUAUUC AGAAA CUUUAA  
           AUUCAUAGG UCUUU GAGAUU  
miRNA  3'                 U        
 
 
target: AT4G31800.2 
length: 1242 
miRNA : ath-miR781
length: 21 
 
mfe: -22.0 kcal/mol 
p-value: 0.081200 
 
position  1145 
target 5' A         G            A 
           UAAGUAUUC AGAAA CUUUAA  
           AUUCAUAGG UCUUU GAGAUU  
miRNA  3'                 U        
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G31800W-boxPositivetransciptN/Amutance17096590

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69417
AccessionTaxon
NP_001031766Arabidopsis thaliana
NP_180072Arabidopsis thaliana
NP_567882 ( AT4G31800 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF031063.000000000000004E-24174232IPR003657DNA-binding WRKY
SMARTSM007741.2000011745813376E-32174234IPR003657DNA-binding WRKY
PfamPF031063.8e-27175233IPR003657DNA-binding WRKY
SMARTSM007741.4e-33175235IPR003657DNA-binding WRKY
PROSITEPS508110.0176235IPR003657DNA-binding WRKY
PROSITEPS5081125.499177236IPR003657DNA-binding WRKY