You are querying gene by "AT4G31500".

Locus: AT4G31500 Alias: ATR4

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone biosynthesis 9675903

Basic gene information ( show / hide contents )

Locus AT4G31500 | Chromosome: 4 | Strand: -
Description
Alias
ATR4( alias )
CYP83B1( alias )
RED1( alias )
RNT1( alias )
SUR2( alias )
Gene model
AT4G31500.1 | From: 15273477 | To: 15275316
Sequence
AT4G31500.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen PMID: 12970475
oxygen binding PMID:
cellular_component
endoplasmic reticulum PMID: 16618929
mitochondrion PMID: 14671022
biological_process
shade avoidance PMID: 9165750
indoleacetic acid biosynthetic process PMID: 11114200
adventitious root development PMID: 16377752
tryptophan biosynthetic process PMID: 11805067
indole glucosinolate biosynthetic process PMID: 11553739
response to red light PMID: 9165750
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
sur2 9675903 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G31500.1 
length: 1745 
miRNA : ath-miR319c
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.016202 
 
position  1101 
target 5' C                C    A 
           AAGGAG UCUCUUCGG UCGA  
           UUCCUC AGGGAAGUC GGUU  
miRNA  3'        G         A      
 
 
target: AT4G31500.1 
length: 1745 
miRNA : ath-miR447a
length: 22 
 
mfe: -27.5 kcal/mol 
p-value: 0.014980 
 
position  792 
target 5' A              A      C 
           GACGAGAC UCUUG CCCUAA  
           UUGUUUUG AGAGC GGGGUU  
miRNA  3' G        U     A        
 
 
target: AT4G31500.1 
length: 1745 
miRNA : ath-miR447b
length: 22 
 
mfe: -27.5 kcal/mol 
p-value: 0.010810 
 
position  792 
target 5' A              A      C 
           GACGAGAC UCUUG CCCUAA  
           UUGUUUUG AGAGC GGGGUU  
miRNA  3' G        U     A        
 
 
target: AT4G31500.1 
length: 1745 
miRNA : ath-miR858
length: 21 
 
mfe: -23.8 kcal/mol 
p-value: 0.058852 
 
position  483 
target 5' A   U                 C 
           GAG GUC AACGGAUGAUGGA  
           UUC CAG UUGUCUGUUGCUU  
miRNA  3'         C             U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10039
AccessionTaxon
NP_174633Arabidopsis thaliana
NP_174634Arabidopsis thaliana
NP_182079Arabidopsis thaliana
NP_182081Arabidopsis thaliana
NP_182082Arabidopsis thaliana
NP_191663Arabidopsis thaliana
NP_850439Arabidopsis thaliana
NP_001046903Oryza sativa Japonica Group
NP_001061964Oryza sativa Japonica Group
NP_001062713Oryza sativa Japonica Group
NP_001063284Oryza sativa Japonica Group
NP_001063285Oryza sativa Japonica Group
e_gw1.2.557.1Physcomitrella patens subsp. patens
e_gw1.271.47.1Physcomitrella patens subsp. patens
e_gw1.367.9.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1690130Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_3420014Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1350041Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_4750013Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_526000004Physcomitrella patens subsp. patens
NP_001043351Oryza sativa Japonica Group
NP_001047183Oryza sativa Japonica Group
NP_001047184Oryza sativa Japonica Group
NP_001047185Oryza sativa Japonica Group
NP_001047192Oryza sativa Japonica Group
NP_001049554Oryza sativa Japonica Group
NP_001057709Oryza sativa Japonica Group
NP_001057998Oryza sativa Japonica Group
NP_001061997Oryza sativa Japonica Group
NP_001062191Oryza sativa Japonica Group
NP_001062193Oryza sativa Japonica Group
NP_001062194Oryza sativa Japonica Group
NP_001063313Oryza sativa Japonica Group
NP_001063314Oryza sativa Japonica Group
NP_001066370Oryza sativa Japonica Group
estExt_Genewise1.C_2000006Physcomitrella patens subsp. patens
estExt_Genewise1.C_220019Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_2000390Physcomitrella patens subsp. patens
NP_196416Arabidopsis thaliana
e_gw1.14.225.1Physcomitrella patens subsp. patens
e_gw1.288.46.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1440031Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_540041Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_1957000002Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_54000018Physcomitrella patens subsp. patens
30170.m014151Ricinus communis
30174.m009168Ricinus communis
fgenesh1_pg.scaffold_366000008Physcomitrella patens subsp. patens
NP_197894Arabidopsis thaliana
NP_197895Arabidopsis thaliana
NP_197896Arabidopsis thaliana
NP_197900Arabidopsis thaliana
NP_001061284Oryza sativa Japonica Group
NP_001064217Oryza sativa Japonica Group
NP_001064221Oryza sativa Japonica Group
NP_001064222Oryza sativa Japonica Group
gw1.10.191.1Physcomitrella patens subsp. patens
gw1.256.12.1Physcomitrella patens subsp. patens
gw1.276.47.1Physcomitrella patens subsp. patens
NP_001064333Oryza sativa Japonica Group
NP_001064338Oryza sativa Japonica Group
e_gw1.262.34.1Physcomitrella patens subsp. patens
NP_180607Arabidopsis thaliana
29706.m001271Ricinus communis
29739.m003754Ricinus communis
30146.m003563Ricinus communis
NP_192968Arabidopsis thaliana
NP_192969Arabidopsis thaliana
29815.m000510Ricinus communis
29815.m000512Ricinus communis
29815.m000515Ricinus communis
29815.m000516Ricinus communis
29815.m000519Ricinus communis
29815.m000520Ricinus communis
NP_195457Arabidopsis thaliana
NP_195459Arabidopsis thaliana
NP_200532Arabidopsis thaliana
NP_568025Arabidopsis thaliana
NP_172767Arabidopsis thaliana
NP_172768Arabidopsis thaliana
NP_172769Arabidopsis thaliana
NP_172770Arabidopsis thaliana
NP_189246Arabidopsis thaliana
NP_189247Arabidopsis thaliana
NP_189248Arabidopsis thaliana
NP_189249Arabidopsis thaliana
NP_189250Arabidopsis thaliana
NP_189251Arabidopsis thaliana
NP_189252Arabidopsis thaliana
NP_189253Arabidopsis thaliana
NP_189254Arabidopsis thaliana
NP_189258Arabidopsis thaliana
NP_189259Arabidopsis thaliana
NP_189318Arabidopsis thaliana
NP_190011Arabidopsis thaliana
NP_190896Arabidopsis thaliana
NP_190898Arabidopsis thaliana
NP_680342Arabidopsis thaliana
NP_177594Arabidopsis thaliana
NP_177595Arabidopsis thaliana
30147.m014296Ricinus communis
30169.m006290Ricinus communis
30190.m011130Ricinus communis
NP_850337Arabidopsis thaliana
NP_001055922Oryza sativa Japonica Group
29940.m000400Ricinus communis
29940.m000401Ricinus communis
NP_001046814Oryza sativa Japonica Group
NP_001046819Oryza sativa Japonica Group
NP_001055190Oryza sativa Japonica Group
NP_171635Arabidopsis thaliana
NP_001060927Oryza sativa Japonica Group
29742.m001406Ricinus communis
NP_001064153Oryza sativa Japonica Group
NP_001066356Oryza sativa Japonica Group
30190.m011069Ricinus communis
NP_179995Arabidopsis thaliana
NP_001044645Oryza sativa Japonica Group
e_gw1.168.38.1Physcomitrella patens subsp. patens
e_gw1.298.22.1Physcomitrella patens subsp. patens
e_gw1.315.25.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_158000059Physcomitrella patens subsp. patens
29976.m000504Ricinus communis
43540.m000048Ricinus communis
NP_190897Arabidopsis thaliana
NP_850731Arabidopsis thaliana
NP_193113Arabidopsis thaliana
NP_194878 ( AT4G31500 )Arabidopsis thaliana
estExt_fgenesh1_pg.C_980044Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_1000053Physcomitrella patens subsp. patens
30138.m003983Ricinus communis
NP_680144Arabidopsis thaliana
NP_850440Arabidopsis thaliana
e_gw1.154.19.1Physcomitrella patens subsp. patens
30129.m000355Ricinus communis
30169.m006291Ricinus communis
NP_001057429Oryza sativa Japonica Group
gw1.198.77.1Physcomitrella patens subsp. patens
gw1.276.54.1Physcomitrella patens subsp. patens
e_gw1.39.105.1Physcomitrella patens subsp. patens
29815.m000517Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR193830.02462IPR001128Cytochrome P450
Gene3DG3DSA:1.10.630.101.0999918447139768E-12624495IPR001128Cytochrome P450
PfamPF000674.599999999999957E-9830492IPR001128Cytochrome P450
SuperFamilySSF482640.030497IPR001128Cytochrome P450
PRINTSPR004631.7000029559005303E-395877IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.7000029559005303E-3982103IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.7000029559005303E-39176194IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.7000029559005303E-39288305IPR002401Cytochrome P450, E-class, group I
PRINTSPR003853.000000679928713E-9299316IPR001128Cytochrome P450
PRINTSPR004631.7000029559005303E-39308334IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.7000029559005303E-39351369IPR002401Cytochrome P450, E-class, group I
PRINTSPR003853.000000679928713E-9352363IPR001128Cytochrome P450
PRINTSPR004631.7000029559005303E-39393417IPR002401Cytochrome P450, E-class, group I
PRINTSPR004631.7000029559005303E-39431441IPR002401Cytochrome P450, E-class, group I
PRINTSPR003853.000000679928713E-9432441IPR001128Cytochrome P450
PROSITEPS000860.0434443IPR017972Cytochrome P450, conserved site
PRINTSPR004631.7000029559005303E-39441464IPR002401Cytochrome P450, E-class, group I