You are querying gene by "AT4G30960".

Locus: AT4G30960 Alias: CIPK6

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone transportion Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. 19187042

Basic gene information ( show / hide contents )

Locus AT4G30960 | Chromosome: 4 | Strand: +
Description Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.
CIPK6( alias )
SIP3( alias )
SNRK3.14( alias )
Gene model
AT4G30960.1 | From: 15067059 | To: 15069016
AT4G30960.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
kinase activity PMID:
cellular_component_unknown PMID:
signal transduction PMID:
protein amino acid phosphorylation PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
atcipk6kd 19187042 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT4G30960.1 
length: 1958 
miRNA : ath-miR171a
length: 21 
mfe: -27.7 kcal/mol 
p-value: 0.012869 
position  1534 
target 5' A      C  G       C    U 
miRNA  3'        C          U      
target: AT4G30960.1 
length: 1958 
miRNA : ath-miR831
length: 22 
mfe: -26.9 kcal/mol 
p-value: 0.010909 
position  1272 
target 5' A                C    A 
miRNA  3' G        A       C      
target: AT4G30960.1 
length: 1958 
miRNA : ath-miR842
length: 21 
mfe: -30.0 kcal/mol 
p-value: 0.006149 
position  367 
target 5' U     A           G    U 
miRNA  3'     A             G      

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_91415
NP_194825 ( AT4G30960 )Arabidopsis thaliana
29003.m000064Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561126.7E-9115325IPR011009Protein kinase-like domain
PfamPF000694.599999999999957E-7024278IPR017442Serine/threonine-protein kinase-like domain
SMARTSM002202.1999990098070715E-10524278IPR002290Serine/threonine-protein kinase domain
PROSITEPS500110.024278IPR000719Protein kinase, catalytic domain
PROSITEPS001070.03057IPR017441Protein kinase, ATP binding site
PANTHERPTHR229820.072438IPR020636Calcium/calmodulin-dependent protein kinase-like
PANTHERPTHR22982:SF450.072438IPR020660CBL-interacting protein kinase
PROSITEPS001080.0142154IPR008271Serine/threonine-protein kinase, active site
PROSITEPS508160.0310334IPR018451NAF/FISL domain
PfamPF038223.7E-20312373IPR004041NAF domain