You are querying gene by "AT4G30270".

Locus: AT4G30270 Alias: MERI-5

Hormone Evidence Function category Gene Description PMID
gibberellinGeneOntology - gibberellic acid mediated signaling

Basic gene information ( show / hide contents )

Locus AT4G30270 | Chromosome: 4 | Strand: -
Description gibberellic acid mediated signaling
Alias
MERI-5( alias )
MERI5B( alias )
SEN4( alias )
Gene model
AT4G30270.1 | From: 14819198 | To: 14820598
Sequence
AT4G30270.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
xyloglucan:xyloglucosyl transferase activity PMID: 10406121
hydrolase activity, acting on glycosyl bonds PMID:
cellular_component
plant-type cell wall PMID: 16287169
cell wall PMID: 15610358
cytoplasm PMID: 15610358
biological_process
gibberellic acid mediated signaling PMID:
aging PMID: 8624406
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other enzymes xyloglucan:xyloglucosyl transferase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G30270.1 
length: 1207 
miRNA : ath-miR771
length: 22 
 
mfe: -31.3 kcal/mol 
p-value: 0.005948 
 
position  908 
target 5' G       U        A    C 
           GA GGUU CCACAGGG GCUC  
           CU CCGA GGUGUCUC CGAG  
miRNA  3' A  C    U             U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51657
AccessionTaxon
NP_194756 ( AT4G30270 )Arabidopsis thaliana
29993.m001055Ricinus communis
29993.m001056Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF0056043.6e-1523268IPR016455Xyloglucan endotransglucosylase/hydrolase
Gene3DG3DSA:2.60.120.2005.2e-1068265IPR013320Concanavalin A-like lectin/glucanase, subgroup
SuperFamilySSF498991.2e-10119265IPR008985Concanavalin A-like lectin/glucanase
PfamPF007225.3e-6125205IPR000757Glycoside hydrolase, family 16
PROSITEPS01034NA98108IPR008263Glycoside hydrolase, family 16, active site
PfamPF069551.1e-21220265IPR010713Xyloglucan endo-transglycosylase, C-terminal