You are querying gene by "AT4G30160".

Locus: AT4G30160 Alias: ATVLN4

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT4G30160 | Chromosome: 4 | Strand: +
Description Arabidopsis thaliana VILLIN4
Alias
ATVLN4( alias )
VLN4( alias )
Gene model
AT4G30160.1 | From: 14753438 | To: 14760195
Sequence
AT4G30160.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
actin binding PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
cytoskeleton organization and biogenesis PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G30160.1 
length: 3910 
miRNA : ath-miR172a
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.010021 
 
position  770 
target 5' G   G    G           A 
           GUG AGUA CAUCAGGAUUC  
           UAC UCGU GUAGUUCUAAG  
miRNA  3'     G    A           A 
 
 
target: AT4G30160.1 
length: 3910 
miRNA : ath-miR172b
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.009503 
 
position  770 
target 5' G   G    G           A 
           GUG AGUA CAUCAGGAUUC  
           UAC UCGU GUAGUUCUAAG  
miRNA  3'     G    A           A 
 
 
target: AT4G30160.1 
length: 3910 
miRNA : ath-miR172c
length: 21 
 
mfe: -27.7 kcal/mol 
p-value: 0.019394 
 
position  771 
target 5' G  G    G           A 
           UG AGUA CAUCAGGAUUC  
           AC UCGU GUAGUUCUAAG  
miRNA  3' G  G    A           A 
 
 
target: AT4G30160.1 
length: 3910 
miRNA : ath-miR172d
length: 21 
 
mfe: -27.7 kcal/mol 
p-value: 0.020129 
 
position  771 
target 5' G  G    G           A 
           UG AGUA CAUCAGGAUUC  
           AC UCGU GUAGUUCUAAG  
miRNA  3' G  G    A           A 
 
 
target: AT4G30160.1 
length: 3910 
miRNA : ath-miR172e
length: 21 
 
mfe: -28.3 kcal/mol 
p-value: 0.016871 
 
position  770 
target 5' G   G    G           A 
           GUG AGUA CAUCAGGAUUC  
           UAC UCGU GUAGUUCUAAG  
miRNA  3'     G    A           G 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10583
AccessionTaxon
NP_001031444Arabidopsis thaliana
NP_029567Arabidopsis thaliana
NP_194745 ( AT4G30160 )Arabidopsis thaliana
NP_200542Arabidopsis thaliana
NP_565958Arabidopsis thaliana
NP_567048Arabidopsis thaliana
190925Chlamydomonas reinhardtii
NP_001050140Oryza sativa Japonica Group
NP_001053784Oryza sativa Japonica Group
NP_001054676Oryza sativa Japonica Group
NP_001058263Oryza sativa Japonica Group
NP_001061335Oryza sativa Japonica Group
e_gw1.20.9.1Physcomitrella patens subsp. patens
e_gw1.299.1.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1000008Physcomitrella patens subsp. patens
29681.m001333Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR1197704974IPR007122Gelsolin
SMARTSM002625e-2819117IPR007122Gelsolin
PfamPF006269.1e-1629111IPR007123Gelsolin domain
SMARTSM002622.4e-26139234IPR007122Gelsolin
PfamPF006263.6e-12150217IPR007123Gelsolin domain
SMARTSM002624.4e-25254344IPR007122Gelsolin
PfamPF006269.6e-09267333IPR007123Gelsolin domain
PRINTSPR005974.3e-45323344IPR007122Gelsolin
SMARTSM002621.5e-20392489IPR007122Gelsolin
PfamPF006260.00011410482IPR007123Gelsolin domain
PRINTSPR005974.3e-45411427IPR007122Gelsolin
PRINTSPR005974.3e-45436454IPR007122Gelsolin
PRINTSPR005974.3e-45469489IPR007122Gelsolin
SMARTSM002623.9e-17519606IPR007122Gelsolin
PRINTSPR005974.3e-45532552IPR007122Gelsolin
PRINTSPR005974.3e-45592611IPR007122Gelsolin
SMARTSM002628.1e-23623719IPR007122Gelsolin
PfamPF006262e-08639711IPR007123Gelsolin domain
PRINTSPR005974.3e-45644666IPR007122Gelsolin
PRINTSPR005974.3e-45673692IPR007122Gelsolin
Gene3DG3DSA:1.10.950.104.1e-20896974IPR003128Villin headpiece
SuperFamilySSF470502.3e-26896974IPR003128Villin headpiece
PROSITEPS5108920.405909974IPR003128Villin headpiece
PfamPF022093.4e-16939974IPR003128Villin headpiece
SMARTSM001535.3e-18939974IPR003128Villin headpiece