You are querying gene by "AT4G29740".

Locus: AT4G29740 Alias: ATCKX4

Hormone Evidence Function category Gene Description PMID
cytokininTransgenic Hormone metabolism It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. 14555694
GeneOntology - cytokinin dehydrogenase activity 14555694

Basic gene information ( show / hide contents )

Locus AT4G29740 | Chromosome: 4 | Strand: +
Description It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Alias
ATCKX4( alias )
CKX4( alias )
Gene model
AT4G29740.2 | From: 14566271 | To: 14569338
AT4G29740.1 | From: 14566271 | To: 14569338
Sequence
AT4G29740.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G29740.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
cytokinin dehydrogenase activity PMID: 14555694
amine oxidase activity PMID: 11154345
cellular_component
endomembrane system PMID:
biological_process
cytokinin catabolic process PMID: 11154345
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other enzymes cytokinin dehydrogenase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   cytokinin   ]

Genotype PMID Type
35S:AtCKX4 14555694 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G29740.1 
length: 1951 
miRNA : ath-miR156a
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.038245 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.1 
length: 1951 
miRNA : ath-miR156b
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.035000 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.1 
length: 1951 
miRNA : ath-miR156c
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.030177 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.1 
length: 1951 
miRNA : ath-miR156d
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.032171 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.1 
length: 1951 
miRNA : ath-miR156e
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.035427 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.1 
length: 1951 
miRNA : ath-miR156f
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.030697 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.1 
length: 1951 
miRNA : ath-miR156g
length: 20 
 
mfe: -25.5 kcal/mol 
p-value: 0.029041 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  C 
 
 
target: AT4G29740.2 
length: 1861 
miRNA : ath-miR156a
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.036519 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.2 
length: 1861 
miRNA : ath-miR156b
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.033157 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.2 
length: 1861 
miRNA : ath-miR156c
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.028649 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.2 
length: 1861 
miRNA : ath-miR156d
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.030714 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.2 
length: 1861 
miRNA : ath-miR156e
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.033744 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.2 
length: 1861 
miRNA : ath-miR156f
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.029316 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  U 
 
 
target: AT4G29740.2 
length: 1861 
miRNA : ath-miR156g
length: 20 
 
mfe: -25.5 kcal/mol 
p-value: 0.027553 
 
position  1335 
target 5' G                A  C 
           GUG UUACUCUCUUCU UC  
           CAC AGUGAGAGAAGA AG  
miRNA  3'     G            C  C 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G29740iPnegativemetabolismN/Atransgenic14555694

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70375
AccessionTaxon
NP_194703Arabidopsis thaliana
NP_565455Arabidopsis thaliana
NP_849470 ( AT4G29740 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561768.0E-4235249IPR016166FAD-binding, type 2
SuperFamilySSF561768e-4235249IPR016166FAD-binding, type 2
PROSITEPS513870.060249IPR016166FAD-binding, type 2
PROSITEPS5138714.18560249IPR016166FAD-binding, type 2
PfamPF015651.6999999999999924E-1964218IPR006094FAD linked oxidase, N-terminal
PfamPF015653.1e-2264218IPR006094FAD linked oxidase, N-terminal
PfamPF092652.1000000000000034E-63250428IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
SuperFamilySSF551038.9E-45250428IPR016164FAD-linked oxidase-like, C-terminal
PfamPF092659.4e-114250523IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
SuperFamilySSF551031.3e-84250524IPR016164FAD-linked oxidase-like, C-terminal