You are querying gene by "AT4G29010".

Locus: AT4G29010 Alias: AIM1

Hormone Evidence Function category Gene Description PMID
jasmonic acidMutant Hormone biosynthesis Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities. 10521521

Basic gene information ( show / hide contents )

Locus AT4G29010 | Chromosome: 4 | Strand: -
Description Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities.
Alias
AIM1( alias )
Gene model
AT4G29010.1 | From: 14297050 | To: 14302141
Sequence
AT4G29010.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
enoyl-CoA hydratase activity PMID: 10521521
biological_process
flower development PMID: 10521521
fatty acid beta-oxidation PMID: 10521521
multicellular organismal development PMID: 10521521
seed germination PMID: 10521521
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   jasmonic acid   ]

Genotype PMID Type
aim1 10521521 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G29010.1 
length: 2565 
miRNA : ath-miR869.1
length: 21 
 
mfe: -22.6 kcal/mol 
p-value: 0.073270 
 
position  1749 
target 5' G                   C 
           GACA CGGGAUUGGAUUAG  
           UUGU GUCUUAACUUGGUU  
miRNA  3' G    G              A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11070
AccessionTaxon
NP_187342Arabidopsis thaliana
NP_194630 ( AT4G29010 )Arabidopsis thaliana
132158Chlamydomonas reinhardtii
NP_001042973Oryza sativa Japonica Group
NP_001046536Oryza sativa Japonica Group
NP_001054687Oryza sativa Japonica Group
fgenesh1_pm.C_Chr_03.0001000088Ostreococcus tauri
e_gw1.75.86.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1650020Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_2830048Physcomitrella patens subsp. patens
29912.m005496Ricinus communis
29726.m004067Ricinus communis
35567.m000014Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF003788.799999999999947E-4317186IPR001753Crotonase, core
PROSITEPS001660.0103123IPR018376Enoyl-CoA hydratase/isomerase, conserved site
Gene3DG3DSA:3.40.50.7201.400005069073092E-60295495IPR016040NAD(P)-binding domain
PfamPF027376.800000000000058E-56311489IPR0061763-hydroxyacyl-CoA dehydrogenase, NAD binding
PROSITEPS000670.0489513IPR0061803-hydroxyacyl-CoA dehydrogenase, conserved site
SuperFamilySSF481795.4E-24491602IPR0089276-phosphogluconate dehydrogenase, C-terminal-like
PfamPF007254.7000000000000055E-17492585IPR0061083-hydroxyacyl-CoA dehydrogenase, C-terminal
Gene3DG3DSA:1.10.1040.104.70000326671344E-13499585IPR013328Dehydrogenase, multihelical
SuperFamilySSF481794.0E-21618708IPR0089276-phosphogluconate dehydrogenase, C-terminal-like
Gene3DG3DSA:1.10.1040.102.9000003626991036E-4629710IPR013328Dehydrogenase, multihelical