You are querying gene by "AT4G28110".

Locus: AT4G28110 Alias: AtMYB41

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT4G28110 | Chromosome: 4 | Strand: -
Description response to abscisic acid stimulus
Alias
AtMYB41( alias )
Gene model
AT4G28110.1 | From: 13968035 | To: 13969390
Sequence
AT4G28110.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
cuticle development PMID: 17971045
regulation of transcription, DNA-dependent PMID:
cell growth PMID: 17971045
response to abscisic acid stimulus PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G28110.1 
length: 986 
miRNA : ath-miR156h
length: 20 
 
mfe: -25.2 kcal/mol 
p-value: 0.003575 
 
position  900 
target 5' U   A              U 
           UGC UUCUUUCUUUUGUU  
           ACG GAGAAAGAAGACAG  
miRNA  3' C   A              U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51608
AccessionTaxon
NP_192419Arabidopsis thaliana
NP_567626Arabidopsis thaliana
29983.m003281Ricinus communis
NP_194540 ( AT4G28110 )Arabidopsis thaliana
NP_001059972Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR106416.400042549616722E-1033268IPR015495Myb transcription factor
PROSITEPS512940.0965IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.602.000000752174648E-161264IPR012287Homeodomain-related
SMARTSM007175.900001049950954E-161363IPR001005SANT, DNA-binding
PfamPF002491.4999999999999992E-131461IPR014778Myb, DNA-binding
SuperFamilySSF466894.9E-231483IPR009057Homeodomain-like
SMARTSM007171.499999775833517E-1666114IPR001005SANT, DNA-binding
PROSITEPS512940.066116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002496.200000000000002E-1267111IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.601.8999985986584312E-1768116IPR012287Homeodomain-related
SuperFamilySSF466893.1E-1286134IPR009057Homeodomain-like