You are querying gene by "AT4G27260".

Locus: AT4G27260 Alias: GH3.5

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus

Basic gene information ( show / hide contents )

Locus AT4G27260 | Chromosome: 4 | Strand: +
Description response to auxin stimulus
GH3.5( alias )
WES1( alias )
Gene model
AT4G27260.1 | From: 13653615 | To: 13656210
AT4G27260.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
indole-3-acetic acid amido synthetase PMID: 15659623
cellular_component_unknown PMID:
response to auxin stimulus PMID:
auxin homeostasis PMID: 15659623
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT4G27260.1 
length: 2246 
miRNA : ath-miR156h
length: 20 
mfe: -26.0 kcal/mol 
p-value: 0.006359 
position  2038 
target 5' U                   U 
miRNA  3' C                     
target: AT4G27260.1 
length: 2246 
miRNA : ath-miR159a
length: 21 
mfe: -25.3 kcal/mol 
p-value: 0.064133 
position  1953 
target 5' A    A          G     A 
miRNA  3' A               A       
target: AT4G27260.1 
length: 2246 
miRNA : ath-miR159b
length: 21 
mfe: -25.6 kcal/mol 
p-value: 0.054576 
position  1952 
target 5' G     A          G     A 
miRNA  3'                  A       
target: AT4G27260.1 
length: 2246 
miRNA : ath-miR1888
length: 21 
mfe: -20.1 kcal/mol 
p-value: 0.082411 
position  2006 
target 5' G     U U           U 
miRNA  3' A     U U           U 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_14809
NP_001031874Arabidopsis thaliana
NP_174134Arabidopsis thaliana
NP_196839Arabidopsis thaliana
NP_196840Arabidopsis thaliana
NP_196841Arabidopsis thaliana
NP_196842Arabidopsis thaliana
NP_001044345Oryza sativa Japonica Group
NP_001044467Oryza sativa Japonica Group
NP_001055967Oryza sativa Japonica Group
NP_001060084Oryza sativa Japonica Group
NP_001060085Oryza sativa Japonica Group
NP_001060163Oryza sativa Japonica Group
27533.m000079Ricinus communis
28152.m000872Ricinus communis
29970.m001008Ricinus communis
30128.m008575Ricinus communis
30129.m000366Ricinus communis
NP_173729Arabidopsis thaliana
NP_175299Arabidopsis thaliana
NP_196836Arabidopsis thaliana
NP_199960Arabidopsis thaliana
NP_176159Arabidopsis thaliana
NP_179101Arabidopsis thaliana
NP_179898Arabidopsis thaliana
NP_182296Arabidopsis thaliana
NP_194456 ( AT4G27260 )Arabidopsis thaliana
NP_195455Arabidopsis thaliana
NP_200262Arabidopsis thaliana
NP_849718Arabidopsis thaliana
estExt_Genewise1.C_3230045Physcomitrella patens subsp. patens
NP_175300Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF033211.1e-20824583IPR004993GH3 auxin-responsive promoter