You are querying gene by "AT4G25490".

Locus: AT4G25490 Alias: CBF1

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT4G25490 | Chromosome: 4 | Strand: -
Description Transcriptional activator that binds to the DRE/CRT regulatory element and induces COR (cold-regulated) gene expression increasing plant freezing tolerance. It encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature and abscisic acid.
Alias
CBF1( alias )
DREB1B( alias )
Gene model
AT4G25490.1 | From: 13021790 | To: 13022735
Sequence
AT4G25490.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 9023378
transcription factor activity PMID: 11118137
transcription activator activity PMID: 9707537
cellular_component
nucleus PMID: 9023378
biological_process
response to water deprivation PMID: 9023378
response to cold PMID: 9735350
cold acclimation PMID: 9525853
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24356
AccessionTaxon
NP_001077764Arabidopsis thaliana
NP_172721Arabidopsis thaliana
NP_176491Arabidopsis thaliana
30147.m014313Ricinus communis
30190.m011119Ricinus communis
30190.m011120Ricinus communis
NP_200012Arabidopsis thaliana
NP_567719Arabidopsis thaliana
NP_567720Arabidopsis thaliana
NP_567721 ( AT4G25490 )Arabidopsis thaliana
NP_001047727Oryza sativa Japonica Group
NP_001053608Oryza sativa Japonica Group
NP_001056661Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.102.4e-2246107IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541712.4e-2346107IPR016177DNA-binding, integrase-type
PfamPF008471.1e-154796IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003802.6e-3347110IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS5103222.35247104IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003671.1e-094859IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003671.1e-097086IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding