You are querying gene by "AT4G24230".

Locus: AT4G24230 Alias: ACBP3

Hormone Evidence Function category Gene Description PMID
salicylic acidTransgenic Hormone signal transduction acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. 20442372
Mutant Hormone signal transduction acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. 20442372

Basic gene information ( show / hide contents )

Locus AT4G24230 | Chromosome: 4 | Strand: -
Description acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.
Alias
ACBP3( alias )
Gene model
AT4G24230.1 | From: 12566641 | To: 12568831
AT4G24230.2 | From: 12566641 | To: 12568856
AT4G24230.3 | From: 12566871 | To: 12568780
AT4G24230.4 | From: 12566954 | To: 12568777
AT4G24230.5 | From: 12567159 | To: 12568778
Sequence
AT4G24230.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G24230.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G24230.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G24230.4 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G24230.5 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
acyl-CoA binding PMID:
cellular_component
extracellular region PMID: 16231156
biological_process
fatty acid transport PMID: 16231156
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
acbp3 20442372 mutant
ACBP3-RNAi 20442372 transgenic
ACBP3-OE 20442372 transgenic
ACBP3-GFP 20442372 transgenic
ACBP3deltaSS-GFP 20442372 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G24230.1 
length: 1653 
miRNA : ath-miR157d
length: 20 
 
mfe: -24.7 kcal/mol 
p-value: 0.008847 
 
position  105 
target 5' U       U        U  C 
           UGCUCUC UGUUUUCU UC  
           ACGAGAG AUAGAAGA AG  
miRNA  3' C                C  U 
 
 
target: AT4G24230.2 
length: 1697 
miRNA : ath-miR157d
length: 20 
 
mfe: -24.7 kcal/mol 
p-value: 0.009139 
 
position  130 
target 5' U       U        U  C 
           UGCUCUC UGUUUUCU UC  
           ACGAGAG AUAGAAGA AG  
miRNA  3' C                C  U 
 
 
target: AT4G24230.3 
length: 1372 
miRNA : ath-miR157d
length: 20 
 
mfe: -24.7 kcal/mol 
p-value: 0.006993 
 
position  54 
target 5' U       U        U  C 
           UGCUCUC UGUUUUCU UC  
           ACGAGAG AUAGAAGA AG  
miRNA  3' C                C  U 
 
 
target: AT4G24230.4 
length: 1293 
miRNA : ath-miR157d
length: 20 
 
mfe: -24.7 kcal/mol 
p-value: 0.006477 
 
position  51 
target 5' U       U        U  C 
           UGCUCUC UGUUUUCU UC  
           ACGAGAG AUAGAAGA AG  
miRNA  3' C                C  U 
 
 
target: AT4G24230.5 
length: 1194 
miRNA : ath-miR157d
length: 20 
 
mfe: -24.7 kcal/mol 
p-value: 0.005834 
 
position  52 
target 5' U       U        U  C 
           UGCUCUC UGUUUUCU UC  
           ACGAGAG AUAGAAGA AG  
miRNA  3' C                C  U 
 
 
target: AT4G24230.6 
length: 1288 
miRNA : ath-miR157d
length: 20 
 
mfe: -24.7 kcal/mol 
p-value: 0.006444 
 
position  38 
target 5' U       U        U  C 
           UGCUCUC UGUUUUCU UC  
           ACGAGAG AUAGAAGA AG  
miRNA  3' C                C  U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37225
AccessionTaxon
NP_001078439Arabidopsis thaliana
NP_001078440Arabidopsis thaliana
NP_001078441Arabidopsis thaliana
NP_001119041Arabidopsis thaliana
NP_194154Arabidopsis thaliana
NP_849432 ( AT4G24230 )Arabidopsis thaliana
29822.m003514Ricinus communis
30170.m013760Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:1.20.80.105.9e-19225318IPR014352FERM/acyl-CoA-binding protein, 3-helical bundle
Gene3DG3DSA:1.20.80.106.300009462872666E-19225318IPR014352FERM/acyl-CoA-binding protein, 3-helical bundle
Gene3DG3DSA:1.20.80.106.300009462872666E-19225318IPR014352FERM/acyl-CoA-binding protein, 3-helical bundle
PfamPF008872.2e-20231311IPR000582Acyl-CoA-binding protein, ACBP
PROSITEPS5122834.945231318IPR000582Acyl-CoA-binding protein, ACBP
SuperFamilySSF470275.8e-22231318IPR000582Acyl-CoA-binding protein, ACBP
PfamPF008871.7999999999999997E-17231311IPR000582Acyl-CoA-binding protein, ACBP
PROSITEPS512280.0231318IPR000582Acyl-CoA-binding protein, ACBP
SuperFamilySSF470275.799996538547805E-22231318IPR000582Acyl-CoA-binding protein, ACBP
PfamPF008871.7999999999999997E-17231311IPR000582Acyl-CoA-binding protein, ACBP
PROSITEPS512280.0231318IPR000582Acyl-CoA-binding protein, ACBP
SuperFamilySSF470275.7E-22231318IPR000582Acyl-CoA-binding protein, ACBP
PANTHERPTHR233101.7e-13250313IPR000582Acyl-CoA-binding protein, ACBP
PANTHERPTHR233101.69999922284067E-13250313IPR000582Acyl-CoA-binding protein, ACBP
PANTHERPTHR233101.69999922284067E-13250313IPR000582Acyl-CoA-binding protein, ACBP