You are querying gene by "AT4G23100".

Locus: AT4G23100 Alias: CAD2

Hormone Evidence Function category Gene Description PMID
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16262714

Basic gene information ( show / hide contents )

Locus AT4G23100 | Chromosome: 4 | Strand: -
Description response to jasmonic acid stimulus
CAD2( alias )
GSH1( alias )
PAD2( alias )
RML1( alias )
Gene model
AT4G23100.1 | From: 12103172 | To: 12107310
AT4G23100.2 | From: 12103172 | To: 12107310
AT4G23100.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G23100.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
glutamate-cysteine ligase activity PMID: 17144898
chloroplast PMID: 15610346
defense response to fungus PMID: 17144898
indole phytoalexin biosynthetic process PMID: 8090752
response to jasmonic acid stimulus PMID: 16262714
response to heat PMID: 15923322
response to ozone PMID: 16262714
defense response to bacterium, incompatible interaction PMID: 8090752
flower development PMID: 11382819
response to cadmium ion PMID: 7770518
glutathione biosynthetic process PMID: 15610346
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Glutamate metabolism glutamate--cysteine ligase
Glutathione metabolism glutamate--cysteine ligase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT4G23100.1 
length: 2055 
miRNA : ath-miR865-3p
length: 21 
mfe: -20.9 kcal/mol 
p-value: 0.028012 
position  291 
target 5' U        U        U   A 
miRNA  3'        U U        U     
target: AT4G23100.2 
length: 2153 
miRNA : ath-miR865-3p
length: 21 
mfe: -20.9 kcal/mol 
p-value: 0.029562 
position  291 
target 5' U        U        U   A 
miRNA  3'        U U        U     

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_23237
NP_001031701Arabidopsis thaliana
NP_194041 ( AT4G23100 )Arabidopsis thaliana
181975Chlamydomonas reinhardtii
NP_001054541Oryza sativa Japonica Group
NP_001059579Oryza sativa Japonica Group
e_gw1. tauri
estExt_fgenesh1_pg.C_4790010Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_28000151Physcomitrella patens subsp. patens
30190.m011214Ricinus communis
e_gw1.244.55.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
TIGRFAMTIGR01436088522IPR011556Glutamate--cysteine ligase, plant
TIGRFAMTIGR014360.088474IPR011556Glutamate--cysteine ligase, plant
PfamPF041075.1e-95139431IPR006336Glutamate--cysteine ligase, GCS2
PfamPF041073.1000000000000525E-92139431IPR006336Glutamate--cysteine ligase, GCS2