You are querying gene by "AT4G19050".

Locus: AT4G19050 Alias: AT4G19050

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT4G19050 | Chromosome: 4 | Strand: -
Description ATP binding / protein binding; FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: leucine-rich repeat family protein (TAIR:AT5G45510.2); Has 24098 Blast hits to 12654 proteins in 512 species: Archae - 25; Bacteria - 1713; Metazoa - 6225; Fungi - 542; Plants - 13996; Viruses - 29; Other Eukaryotes - 1568 (source: NCBI BLink).
Alias
AT4G19050( alias )
Gene model
AT4G19050.1 | From: 10438224 | To: 10443797
Sequence
AT4G19050.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
defense response PMID:
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Cell cycle - yeasts maintenance of ploidy protein MOB1 (MPS1 binder 1)
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G19050.1 
length: 3606 
miRNA : ath-miR159a
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.085272 
 
position  3094 
target 5' A    U           A     U 
           UGGA GUUCUCUUCGA UCAGA  
           AUCU CGAGGGAAGUU GGUUU  
miRNA  3'                  A       
 
 
target: AT4G19050.1 
length: 3606 
miRNA : ath-miR159c
length: 21 
 
mfe: -26.8 kcal/mol 
p-value: 0.057683 
 
position  3095 
target 5' U   U           A     U 
           GGA GUUCUCUUCGA UCAGA  
           CCU CGAGGGAAGUU GGUUU  
miRNA  3' U               A       
 
 
target: AT4G19050.1 
length: 3606 
miRNA : ath-miR163
length: 24 
 
mfe: -30.1 kcal/mol 
p-value: 0.010395 
 
position  1339 
target 5' C        G              G 
           UUGAAGUU U AGUCCUCUUUGA  
           AGCUUCAA G UCAGGAGAAGUU  
miRNA  3' U        G U              
 
 
target: AT4G19050.1 
length: 3606 
miRNA : ath-miR781
length: 21 
 
mfe: -23.2 kcal/mol 
p-value: 0.144993 
 
position  2819 
target 5' C    A G              C 
           AAGU A UCAGAGGGCUCUAG  
           UUCA U GGUCUUUUGAGAUU  
miRNA  3' A      A                
 
 
target: AT4G19050.1 
length: 3606 
miRNA : ath-miR868
length: 21 
 
mfe: -22.3 kcal/mol 
p-value: 0.083942 
 
position  3402 
target 5' U  U                 C 
           GU UUAUCAGUACUU GGAG  
           CG AAUAGUCGUGAA UCUU  
miRNA  3'    U            U    C 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51174
AccessionTaxon
NP_001078719Arabidopsis thaliana
NP_193640 ( AT4G19050 )Arabidopsis thaliana
NP_199364Arabidopsis thaliana
NP_001044527Oryza sativa Japonica Group
29827.m002574Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF009315.5e-1613300IPR002182NB-ARC
PRINTSPR003641.7e-092843IPR000767Disease resistance protein
PRINTSPR003641.7e-09112126IPR000767Disease resistance protein
PRINTSPR003641.7e-09223237IPR000767Disease resistance protein
PRINTSPR003641.7e-09839855IPR000767Disease resistance protein