You are querying gene by "AT4G17720".

Locus: AT4G17720 Alias: AT4G17720

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT4G17720 | Chromosome: 4 | Strand: -
Description RNA recognition motif (RRM)-containing protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT5G46870.1); Has 381 Blast hits to 361 proteins in 83 species: Archae - 2; Bacteria - 16; Metazoa - 30; Fungi - 84; Plants - 147; Viruses - 12; Other Eukaryotes - 90 (source: NCBI BLink).
AT4G17720( alias )
Gene model
AT4G17720.1 | From: 9862459 | To: 9864676
AT4G17720.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
nucleic acid binding PMID:
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT4G17720.1 
length: 1321 
miRNA : ath-miR861-5p
length: 21 
mfe: -24.9 kcal/mol 
p-value: 0.006511 
position  187 
target 5' G      A             A 
miRNA  3' A   G                C 
target: AT4G17720.1 
length: 1321 
miRNA : ath-miR866-5p
length: 21 
mfe: -22.3 kcal/mol 
p-value: 0.029033 
position  245 
target 5' C      U U     A      G 
miRNA  3' A      U       A        

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_15517
NP_001078595Arabidopsis thaliana
NP_001078596Arabidopsis thaliana
NP_197186Arabidopsis thaliana
NP_001053727Oryza sativa Japonica Group
NP_001053934Oryza sativa Japonica Group
estExt_Genewise1.C_1000095Physcomitrella patens subsp. patens
estExt_Genewise1.C_170120Physcomitrella patens subsp. patens
gw1.174.82.1Physcomitrella patens subsp. patens
gw1.9.313.1Physcomitrella patens subsp. patens
30073.m002271Ricinus communis
0100010283Ostreococcus tauri
NP_001056594Oryza sativa Japonica Group
NP_199498Arabidopsis thaliana
NP_567536 ( AT4G17720 )Arabidopsis thaliana
gw1.49.184.1Physcomitrella patens subsp. patens
29682.m000595Ricinus communis
NP_001051073Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:, alpha-beta plait
PROSITEPS501020.0478IPR000504RNA recognition motif, RNP-1
SMARTSM003602.5999994671899463E-6574IPR000504RNA recognition motif, RNP-1
PfamPF000764.499999999999998E-4869IPR000504RNA recognition motif, RNP-1
PANTHERPTHR117322.0000139277203622E-9421253IPR001395Aldo/keto reductase