You are querying gene by "AT4G17615".

Locus: AT4G17615 Alias: ATCBL1

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - abscisic acid mediated signaling 0012194854

Basic gene information ( show / hide contents )

Locus AT4G17615 | Chromosome: 4 | Strand: +
Description abscisic acid mediated signaling
Alias
ATCBL1( alias )
CBL1( alias )
SCABP5( alias )
Gene model
AT4G17615.1 | From: 9816465 | To: 9819325
AT4G17615.2 | From: 9816579 | To: 9819325
Sequence
AT4G17615.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G17615.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
calcium ion binding PMID:
cellular_component
plasma membrane PMID:
biological_process
abscisic acid mediated signaling PMID: 0012194854
response to water deprivation PMID: 17922773
response to cold PMID: 12897256
stomatal movement PMID: 17922773
N-terminal protein myristoylation PMID: 12912986
response to osmotic stress PMID: 10200328
calcium-mediated signaling PMID: 10590166
potassium ion import PMID: 17922773
response to salt stress PMID: 12897256
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G17615.2 
length: 1426 
miRNA : ath-miR861-3p
length: 21 
 
mfe: -24.0 kcal/mol 
p-value: 0.014741 
 
position  461 
target 5' U   A   C            C 
           UCC UGA GAUAUGUCUGUU  
           AGG ACU CUGUAUAGGUAG  
miRNA  3' C   A   U              
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_70595
AccessionTaxon
NP_199521Arabidopsis thaliana
NP_567533 ( AT4G17615 )Arabidopsis thaliana
NP_974566Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR23056:SF36.6e-1372210IPR015757Calcineurin B protein
Gene3DG3DSA:1.10.238.103.1000130737018865E-374163IPR011992EF-hand-like domain
PANTHERPTHR23056:SF37.400007803977036E-10613168IPR015757Calcineurin B protein
Gene3DG3DSA:1.10.238.102e-4720205IPR011992EF-hand-like domain
PROSITEPS502220.02560IPR018249EF-HAND 2
SMARTSM0005422.0000021756081742957IPR002048Calcium-binding EF-hand
PRINTSPR004503.300001644806241E-63354IPR001125Recoverin
PROSITEPS502220.06297IPR018249EF-HAND 2
SMARTSM000540.012999999583543576694IPR002048Calcium-binding EF-hand
PROSITEPS5022210.35767102IPR018249EF-HAND 2
SMARTSM00054307199IPR002048Calcium-binding EF-hand
PRINTSPR004505.4e-067596IPR001125Recoverin
PROSITEPS000180.07587IPR018247EF-Hand 1, calcium-binding site
PRINTSPR004503.300001644806241E-68098IPR001125Recoverin
PROSITEPS5022213.007104139IPR018249EF-HAND 2
PROSITEPS502220.0106141IPR018249EF-HAND 2
SMARTSM000540.018108136IPR002048Calcium-binding EF-hand
SMARTSM000540.18999999024834108110138IPR002048Calcium-binding EF-hand
PROSITEPS00018NA117129IPR018247EF-Hand 1, calcium-binding site
PROSITEPS000180.0119131IPR018247EF-Hand 1, calcium-binding site
PRINTSPR004505.4e-06122140IPR001125Recoverin
PRINTSPR004503.300001644806241E-6126146IPR001125Recoverin
PROSITEPS5022210.999148183IPR018249EF-HAND 2
SMARTSM000540.25152180IPR002048Calcium-binding EF-hand
PROSITEPS00018NA161173IPR018247EF-Hand 1, calcium-binding site
PRINTSPR004505.4e-06168188IPR001125Recoverin