You are querying gene by "AT4G16890".

Locus: AT4G16890 Alias: BAL

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 17919906

Basic gene information ( show / hide contents )

Locus AT4G16890 | Chromosome: 4 | Strand: -
Description response to auxin stimulus
Alias
BAL( alias )
SNC1( alias )
Gene model
AT4G16890.1 | From: 9500525 | To: 9505474
Sequence
AT4G16890.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
nucleotide binding PMID: 11605952
cellular_component
intrinsic to membrane PMID:
biological_process
response to auxin stimulus PMID: 17919906
defense response PMID:
systemic acquired resistance, salicylic acid mediated signaling pathway PMID: 11605952
defense response to bacterium, incompatible interaction PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G16890.1 
length: 3906 
miRNA : ath-miR170
length: 21 
 
mfe: -24.2 kcal/mol 
p-value: 0.071490 
 
position  2593 
target 5' A               U   U 
           AUAUUG UAUGGCUC AUC  
           UAUAAC GUGCCGAG UAG  
miRNA  3' C      U        U   U 
 
 
target: AT4G16890.1 
length: 3906 
miRNA : ath-miR170
length: 21 
 
mfe: -24.2 kcal/mol 
p-value: 0.071490 
 
position  3064 
target 5' A               U   U 
           AUAUUG UAUGGCUC AUC  
           UAUAAC GUGCCGAG UAG  
miRNA  3' C      U        U   U 
 
 
target: AT4G16890.1 
length: 3906 
miRNA : ath-miR1886.3
length: 21 
 
mfe: -21.1 kcal/mol 
p-value: 0.058444 
 
position  1929 
target 5' U  U     C           G 
           GU GGAUG AAAUCUUUGGU  
           CA UCUAC UUUAGAAAUUA  
miRNA  3' U  U                 A 
 
 
target: AT4G16890.1 
length: 3906 
miRNA : ath-miR773
length: 21 
 
mfe: -27.6 kcal/mol 
p-value: 0.027975 
 
position  396 
target 5' U    A C               C 
           GAGA A AAAGUUGGAAGCAAG  
           CUCU U UUUCGACCUUCGUUU  
miRNA  3'      G                   
 
 
target: AT4G16890.1 
length: 3906 
miRNA : ath-miR863-3p
length: 21 
 
mfe: -25.2 kcal/mol 
p-value: 0.010867 
 
position  3583 
target 5' U   A                U 
           UUA GUUUUGUUGCUC CAA  
           AAU CAGAACAACGAG GUU  
miRNA  3' U   A            A     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12324
AccessionTaxon
NP_001077768Arabidopsis thaliana
NP_001077769Arabidopsis thaliana
NP_001078237Arabidopsis thaliana
NP_001118772Arabidopsis thaliana
NP_001154443Arabidopsis thaliana
NP_001154444Arabidopsis thaliana
NP_001154757Arabidopsis thaliana
NP_176043Arabidopsis thaliana
NP_176044Arabidopsis thaliana
NP_176047Arabidopsis thaliana
NP_176560Arabidopsis thaliana
NP_176561Arabidopsis thaliana
NP_176562Arabidopsis thaliana
NP_176571Arabidopsis thaliana
NP_176572Arabidopsis thaliana
NP_176590Arabidopsis thaliana
NP_176760Arabidopsis thaliana
NP_179279Arabidopsis thaliana
NP_190026Arabidopsis thaliana
NP_190053Arabidopsis thaliana
NP_192855Arabidopsis thaliana
NP_193173Arabidopsis thaliana
NP_198650Arabidopsis thaliana
NP_198651Arabidopsis thaliana
NP_198701Arabidopsis thaliana
NP_198822Arabidopsis thaliana
NP_198907Arabidopsis thaliana
NP_198969Arabidopsis thaliana
NP_198970Arabidopsis thaliana
NP_198989Arabidopsis thaliana
NP_198990Arabidopsis thaliana
NP_199725Arabidopsis thaliana
NP_200620Arabidopsis thaliana
NP_851117Arabidopsis thaliana
NP_001117396Arabidopsis thaliana
NP_174439Arabidopsis thaliana
NP_179024Arabidopsis thaliana
NP_187072Arabidopsis thaliana
NP_189178Arabidopsis thaliana
NP_190034Arabidopsis thaliana
NP_190049Arabidopsis thaliana
NP_192585Arabidopsis thaliana
NP_193420Arabidopsis thaliana
NP_193422 ( AT4G16890 )Arabidopsis thaliana
NP_193424Arabidopsis thaliana
NP_193425Arabidopsis thaliana
NP_193428Arabidopsis thaliana
NP_193429Arabidopsis thaliana
NP_196686Arabidopsis thaliana
NP_197298Arabidopsis thaliana
NP_197336Arabidopsis thaliana
NP_197337Arabidopsis thaliana
NP_197338Arabidopsis thaliana
NP_197661Arabidopsis thaliana
NP_199264Arabidopsis thaliana
NP_199438Arabidopsis thaliana
NP_199439Arabidopsis thaliana
NP_199457Arabidopsis thaliana
NP_199459Arabidopsis thaliana
NP_199463Arabidopsis thaliana
NP_199464Arabidopsis thaliana
NP_199976Arabidopsis thaliana
NP_564971Arabidopsis thaliana
NP_849398Arabidopsis thaliana
NP_850654Arabidopsis thaliana
NP_850655Arabidopsis thaliana
NP_851172Arabidopsis thaliana
NP_193427Arabidopsis thaliana
NP_566223Arabidopsis thaliana
NP_974894Arabidopsis thaliana
NP_568664Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF522007.8E-441154IPR000157Toll-Interleukin receptor
PROSITEPS501040.010147IPR000157Toll-Interleukin receptor
SMARTSM002559.699975333544073E-5811147IPR000157Toll-Interleukin receptor
PfamPF015823.5000000000000027E-3814142IPR000157Toll-Interleukin receptor
PfamPF009311.4999999999999958E-26187442IPR002182NB-ARC
SMARTSM003820.0032000007471964438204341IPR003593ATPase, AAA+ type, core
PRINTSPR003645.299996575501887E-26207222IPR000767Disease resistance protein
PRINTSPR003645.299996575501887E-26281295IPR000767Disease resistance protein
PRINTSPR003645.299996575501887E-26374388IPR000767Disease resistance protein
PfamPF00560200.00000000000006637658IPR001611Leucine-rich repeat
PfamPF00560570.0000000000001684701IPR001611Leucine-rich repeat
PRINTSPR003645.299996575501887E-26840856IPR000767Disease resistance protein
PfamPF00560490.0000000000004844861IPR001611Leucine-rich repeat
PfamPF00560479.9999999999998911928IPR001611Leucine-rich repeat