You are querying gene by "AT4G16110".

Locus: AT4G16110 Alias: ARR2

Hormone Evidence Function category Gene Description PMID
cytokininGeneOntology - response to cytokinin stimulus 16407152
ethyleneGeneOntology - ethylene mediated signaling pathway 16961732

Basic gene information ( show / hide contents )

Locus AT4G16110 | Chromosome: 4 | Strand: +
Description ethylene mediated signaling pathway
Alias
ARR2( alias )
Gene model
AT4G16110.1 | From: 9112947 | To: 9115676
Sequence
AT4G16110.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
two-component response regulator activity PMID:
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 11370868
biological_process
cytokinin mediated signaling PMID: 12068096
ethylene mediated signaling pathway PMID: 16961732
leaf senescence PMID: 16407152
response to cytokinin stimulus PMID: 16407152
regulation of stomatal movement PMID: 16961732
response to ethylene stimulus PMID: 15282545
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G16110.1 
length: 2666 
miRNA : ath-miR404
length: 24 
 
mfe: -33.4 kcal/mol 
p-value: 0.007841 
 
position  982 
target 5' U        G    A     G      C 
           GCUGCUGU AAUC GCUAG CGUUGA  
           CGACGGCG UUGG CGGUC GCAAUU  
miRNA  3'                            A 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G16110AT1G10470PositiveotherN/Amutance18262459
AT4G16110AT1G19050PositiveotherN/Amutance18262459
AT4G16110AT1G59940PositiveotherN/Amutance18262459
AT4G16110AT1G74890PositiveotherN/Amutance18262459
AT4G16110AT1G75820negativetransciptN/Amolecular18262469
AT4G16110AT2G40670PositiveotherN/Amutance18262459
AT4G16110AT2G41310PositiveotherN/Amutance18262459
AT4G16110AT3G48100PositiveotherN/Amutance18262459
AT4G16110AT3G51770negativeotherN/Amolecular18980656
AT4G16110AT3G56380PositiveotherN/Amutance18262459
AT4G16110AT3G57040PositiveotherN/Amutance18262459
AT4G16110AT4G16110Positivemodification PAT1G03430mutance11828030
AT4G16110AT4G16110Positivemodification PAT3G16360mutance11828030
AT4G16110AT4G16110Positivemodification PAT3G21510mutance11828030
AT4G16110AT4G16110Positivemodification PAT3G29350mutance11828030
AT4G16110AT4G16110Positivemodification PAT5G39340mutance11828030
AT4G16110AT4G16110PositiveotherN/Amutance18262459
AT4G16110AT4G16110negativeotherN/Amutance18262459
AT4G16110AT4G21150PositiveotherN/Amutance18262459
AT4G16110AT4G38630PositiveotherN/Amutance18262459
AT4G16110AT5G10720PositivetransciptN/Amolecular17202180
AT4G16110AT5G62920PositiveotherN/Amutance18262459

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25301
AccessionTaxon
NP_001049427Oryza sativa Japonica Group
NP_193346 ( AT4G16110 )Arabidopsis thaliana
NP_566561Arabidopsis thaliana
NP_850600Arabidopsis thaliana
113139Chlamydomonas reinhardtii
estExt_fgenesh1_pg.C_Chr_16.00010090Ostreococcus tauri
e_gw1.10.288.1Physcomitrella patens subsp. patens
e_gw1.16.93.1Physcomitrella patens subsp. patens
e_gw1.362.4.1Physcomitrella patens subsp. patens
29889.m003245Ricinus communis
27647.m000179Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF03639204661IPR017053Response regulator, plant B-type
SuperFamilySSF521728.5e-3525148IPR011006CheY-like
SMARTSM004486.5e-3028140IPR001789Signal transduction response regulator, receiver domain
PROSITEPS5011031.40229144IPR001789Signal transduction response regulator, receiver domain
PfamPF000727e-2230138IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:1.10.10.601.6e-23212275IPR012287Homeodomain-related
SuperFamilySSF466892.5e-20212275IPR009057Homeodomain-like
PROSITEPS5129411.323213272IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
TIGRFAMTIGR015574.4e-30216271IPR006447Myb-like DNA-binding domain, SHAQKYF class
PfamPF002491.4e-11218268IPR014778Myb, DNA-binding