You are querying gene by "AT4G15900".

Locus: AT4G15900 Alias: PRL1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction Encodes a nuclear WD40 domain protein that is imported into the nucleus. 9765207

Basic gene information ( show / hide contents )

Locus AT4G15900 | Chromosome: 4 | Strand: +
Description Encodes a nuclear WD40 domain protein that is imported into the nucleus.
PRL1( alias )
Gene model
AT4G15900.1 | From: 9023743 | To: 9027681
AT4G15900.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
protein binding PMID: 10220464
negative regulator of basal transcription activity PMID: 9765207
nucleotide binding PMID:
nucleus PMID: 9765207
defense response to fungus PMID: 17575050
defense response signaling pathway, resistance gene-independent PMID: 17575050
cotyledon development PMID: 18223036
fruit development PMID: 18223036
defense response to bacterium PMID: 17575050
defense response signaling pathway, resistance gene-dependent PMID: 17575050
root development PMID: 18223036
sugar mediated signaling PMID: 18223036
negative regulation of transcription PMID: 10220464
proteolysis PMID: 18223036
response to glucose stimulus PMID: 9765207
hormone-mediated signaling PMID: 18223036
leaf development PMID: 18223036
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
prl1-1 9765207 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT4G15900.1 
length: 1731 
miRNA : ath-miR397a
length: 21 
mfe: -27.5 kcal/mol 
p-value: 0.010550 
position  478 
target 5' U      U              A 
miRNA  3' G               G       
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT4G15900AT5G05690Positivemodification PN/Amolecular9765207
AT4G15900ATHKAP2Positivemodification PN/Amolecular9765207

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11746
NP_193325 ( AT4G15900 )Arabidopsis thaliana
NP_566557Arabidopsis thaliana
48734Chlamydomonas reinhardtii
NP_001050058Oryza sativa Japonica Group
e_gw1. tauri
e_gw1.169.38.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_4020035Physcomitrella patens subsp. patens
29726.m004060Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA: repeat-like-containing domain
SuperFamilySSF509785.6e-75163485IPR011046WD40 repeat-like-containing domain
SMARTSM003206.7e-11165204IPR001680WD40 repeat
PfamPF004003.6e-12166204IPR019781WD40 repeat, subgroup
PROSITEPS5008215.855172213IPR019782WD40 repeat 2
PROSITEPS5029456.421172472IPR017986WD40-repeat-containing domain
PRINTSPR003202e-07191205IPR020472G-protein beta WD-40 repeat, region
SMARTSM003202e-06207246IPR001680WD40 repeat
PfamPF004001.4e-05209246IPR019781WD40 repeat, subgroup
PROSITEPS5008213.316214255IPR019782WD40 repeat 2
SMARTSM003207e-09249288IPR001680WD40 repeat
PfamPF004001.9e-08251288IPR019781WD40 repeat, subgroup
PROSITEPS5008213.783256297IPR019782WD40 repeat 2
PRINTSPR003202e-07275289IPR020472G-protein beta WD-40 repeat, region
PROSITEPS00678NA275289IPR019775WD40 repeat, conserved site
SMARTSM003209e-06291330IPR001680WD40 repeat
PfamPF004006.7e-07297330IPR019781WD40 repeat, subgroup
PROSITEPS5008215.187298339IPR019782WD40 repeat 2
PRINTSPR003202e-07317331IPR020472G-protein beta WD-40 repeat, region
PROSITEPS00678NA317331IPR019775WD40 repeat, conserved site
SMARTSM003201.2333371IPR001680WD40 repeat
PfamPF004000.00028335367IPR019781WD40 repeat, subgroup
SMARTSM003200.14375413IPR001680WD40 repeat
PROSITEPS500828.604382422IPR019782WD40 repeat 2
PfamPF004001.2389413IPR019781WD40 repeat, subgroup
SMARTSM003200.037425463IPR001680WD40 repeat
PfamPF004000.012435463IPR019781WD40 repeat, subgroup