You are querying gene by "AT4G15530".

Locus: AT4G15530 Alias: PPDK

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT4G15530 | Chromosome: 4 | Strand: -
Description The product of this shorter transcript (no chloroplast targeting sequence) was shown to accumulate in the cytosol, whereas the longest transcript was found in the chloroplast. They were also found in slightly different tissues.
Alias
PPDK( alias )
Gene model
AT4G15530.2 | From: 8864826 | To: 8869271
AT4G15530.1 | From: 8864826 | To: 8870905
AT4G15530.3 | From: 8864826 | To: 8870905
AT4G15530.4 | From: 8864826 | To: 8870934
AT4G15530.5 | From: 8864826 | To: 8870799
Sequence
AT4G15530.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G15530.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G15530.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G15530.4 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G15530.5 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
kinase activity PMID:
pyruvate, phosphate dikinase activity PMID: 16915520
cellular_component
cytosol PMID: 16915520
chloroplast PMID: 16915520
biological_process
phosphorylation PMID:
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Pyruvate metabolism pyruvate,orthophosphate dikinase
Carbon fixation pyruvate,orthophosphate dikinase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G15530.1 
length: 2990 
miRNA : ath-miR159a
length: 21 
 
mfe: -32.9 kcal/mol 
p-value: 0.003548 
 
position  949 
target 5' A             G       G 
           AGAGUUUCCUUCA AUCCAAA  
           UCUCGAGGGAAGU UAGGUUU  
miRNA  3' A                       
 
 
target: AT4G15530.1 
length: 2990 
miRNA : ath-miR159b
length: 21 
 
mfe: -33.1 kcal/mol 
p-value: 0.003100 
 
position  948 
target 5' C              G       G 
           AAGAGUUUCCUUCA AUCCAAA  
           UUCUCGAGGGAAGU UAGGUUU  
miRNA  3'                          
 
 
target: AT4G15530.1 
length: 2990 
miRNA : ath-miR2112-5p
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.014794 
 
position  2356 
target 5' U        U      G    A 
           GC UUGGU UCCGCG UUGC  
           UG AACUA AGGCGU AACG  
miRNA  3'    U     U      A    C 
 
 
target: AT4G15530.2 
length: 2718 
miRNA : ath-miR159a
length: 21 
 
mfe: -32.9 kcal/mol 
p-value: 0.003144 
 
position  677 
target 5' A             G       G 
           AGAGUUUCCUUCA AUCCAAA  
           UCUCGAGGGAAGU UAGGUUU  
miRNA  3' A                       
 
 
target: AT4G15530.2 
length: 2718 
miRNA : ath-miR159b
length: 21 
 
mfe: -33.1 kcal/mol 
p-value: 0.002743 
 
position  676 
target 5' C              G       G 
           AAGAGUUUCCUUCA AUCCAAA  
           UUCUCGAGGGAAGU UAGGUUU  
miRNA  3'                          
 
 
target: AT4G15530.2 
length: 2718 
miRNA : ath-miR2112-5p
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.013488 
 
position  2084 
target 5' U        U      G    A 
           GC UUGGU UCCGCG UUGC  
           UG AACUA AGGCGU AACG  
miRNA  3'    U     U      A    C 
 
 
target: AT4G15530.3 
length: 3026 
miRNA : ath-miR159a
length: 21 
 
mfe: -32.9 kcal/mol 
p-value: 0.003601 
 
position  985 
target 5' A             G       G 
           AGAGUUUCCUUCA AUCCAAA  
           UCUCGAGGGAAGU UAGGUUU  
miRNA  3' A                       
 
 
target: AT4G15530.3 
length: 3026 
miRNA : ath-miR159b
length: 21 
 
mfe: -33.1 kcal/mol 
p-value: 0.003147 
 
position  984 
target 5' C              G       G 
           AAGAGUUUCCUUCA AUCCAAA  
           UUCUCGAGGGAAGU UAGGUUU  
miRNA  3'                          
 
 
target: AT4G15530.3 
length: 3026 
miRNA : ath-miR2112-5p
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.014964 
 
position  2392 
target 5' U        U      G    A 
           GC UUGGU UCCGCG UUGC  
           UG AACUA AGGCGU AACG  
miRNA  3'    U     U      A    C 
 
 
target: AT4G15530.4 
length: 2963 
miRNA : ath-miR159a
length: 21 
 
mfe: -32.9 kcal/mol 
p-value: 0.003507 
 
position  922 
target 5' A             G       G 
           AGAGUUUCCUUCA AUCCAAA  
           UCUCGAGGGAAGU UAGGUUU  
miRNA  3' A                       
 
 
target: AT4G15530.4 
length: 2963 
miRNA : ath-miR159b
length: 21 
 
mfe: -33.1 kcal/mol 
p-value: 0.003064 
 
position  921 
target 5' C              G       G 
           AAGAGUUUCCUUCA AUCCAAA  
           UUCUCGAGGGAAGU UAGGUUU  
miRNA  3'                          
 
 
target: AT4G15530.4 
length: 2963 
miRNA : ath-miR2112-5p
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.014665 
 
position  2329 
target 5' U        U      G    A 
           GC UUGGU UCCGCG UUGC  
           UG AACUA AGGCGU AACG  
miRNA  3'    U     U      A    C 
 
 
target: AT4G15530.5 
length: 2945 
miRNA : ath-miR159a
length: 21 
 
mfe: -32.9 kcal/mol 
p-value: 0.003481 
 
position  904 
target 5' A             G       G 
           AGAGUUUCCUUCA AUCCAAA  
           UCUCGAGGGAAGU UAGGUUU  
miRNA  3' A                       
 
 
target: AT4G15530.5 
length: 2945 
miRNA : ath-miR159b
length: 21 
 
mfe: -33.1 kcal/mol 
p-value: 0.003041 
 
position  903 
target 5' C              G       G 
           AAGAGUUUCCUUCA AUCCAAA  
           UUCUCGAGGGAAGU UAGGUUU  
miRNA  3'                          
 
 
target: AT4G15530.5 
length: 2945 
miRNA : ath-miR2112-5p
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.014580 
 
position  2311 
target 5' U        U      G    A 
           GC UUGGU UCCGCG UUGC  
           UG AACUA AGGCGU AACG  
miRNA  3'    U     U      A    C 
 
 
target: AT4G15530.6 
length: 2908 
miRNA : ath-miR159a
length: 21 
 
mfe: -32.9 kcal/mol 
p-value: 0.003426 
 
position  867 
target 5' A             G       G 
           AGAGUUUCCUUCA AUCCAAA  
           UCUCGAGGGAAGU UAGGUUU  
miRNA  3' A                       
 
 
target: AT4G15530.6 
length: 2908 
miRNA : ath-miR159b
length: 21 
 
mfe: -33.1 kcal/mol 
p-value: 0.002992 
 
position  866 
target 5' C              G       G 
           AAGAGUUUCCUUCA AUCCAAA  
           UUCUCGAGGGAAGU UAGGUUU  
miRNA  3'                          
 
 
target: AT4G15530.6 
length: 2908 
miRNA : ath-miR2112-5p
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.014403 
 
position  2274 
target 5' U        U      G    A 
           GC UUGGU UCCGCG UUGC  
           UG AACUA AGGCGU AACG  
miRNA  3'    U     U      A    C 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10556
AccessionTaxon
NP_001031647Arabidopsis thaliana
NP_001078395 ( AT4G15530 )Arabidopsis thaliana
NP_001078396Arabidopsis thaliana
NP_001118987Arabidopsis thaliana
NP_193288Arabidopsis thaliana
NP_849391Arabidopsis thaliana
133570Chlamydomonas reinhardtii
196616Chlamydomonas reinhardtii
NP_001050430Oryza sativa Japonica Group
NP_001055507Oryza sativa Japonica Group
estExt_fgenesh1_pm.C_Chr_02.00010080Ostreococcus tauri
fgenesh1_pm.C_Chr_09.0001000063Ostreococcus tauri
estExt_gwp_gw1.C_230034Physcomitrella patens subsp. patens
29726.m003947Ricinus communis
fgenesh1_pg.scaffold_8195000001Physcomitrella patens subsp. patens
28796.m000044Ricinus communis
fgenesh1_pg.C_Chr_04.0001000273Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.1490.201.1000015067164284E-421227IPR013815ATP-grasp fold, subdomain 1
PIRPIRSF0008530.01857IPR010121Pyruvate, phosphate dikinase
TIGRFAMTIGR018280.01856IPR010121Pyruvate, phosphate dikinase
PIRPIRSF00085301875IPR010121Pyruvate, phosphate dikinase
Gene3DG3DSA:3.30.1490.202.4e-452245IPR013815ATP-grasp fold, subdomain 1
TIGRFAMTIGR0182802874IPR010121Pyruvate, phosphate dikinase
PfamPF013261.9999999999999944E-584345IPR002192Pyruvate phosphate dikinase, PEP/pyruvate-binding
PfamPF013261.6e-6120363IPR002192Pyruvate phosphate dikinase, PEP/pyruvate-binding
PIRPIRSF0008530.082956IPR010121Pyruvate, phosphate dikinase
Gene3DG3DSA:3.30.1490.201.2000011745813984E-4583326IPR013815ATP-grasp fold, subdomain 1
TIGRFAMTIGR018280.083955IPR010121Pyruvate, phosphate dikinase
PIRPIRSF000853089963IPR010121Pyruvate, phosphate dikinase
Gene3DG3DSA:3.30.1490.201.2e-4590333IPR013815ATP-grasp fold, subdomain 1
TIGRFAMTIGR01828090962IPR010121Pyruvate, phosphate dikinase
PfamPF013261.4999999999999958E-58101444IPR002192Pyruvate phosphate dikinase, PEP/pyruvate-binding
PfamPF013262e-61108451IPR002192Pyruvate phosphate dikinase, PEP/pyruvate-binding
Gene3DG3DSA:3.30.470.201.9999963603453647E-42228325IPR013816ATP-grasp fold, subdomain 2
Gene3DG3DSA:3.30.470.201.9e-42246343IPR013816ATP-grasp fold, subdomain 2
Gene3DG3DSA:3.30.470.201.9999963603453647E-42327424IPR013816ATP-grasp fold, subdomain 2
Gene3DG3DSA:3.30.470.201.9e-42334431IPR013816ATP-grasp fold, subdomain 2
SuperFamilySSF520092.6E-37361489IPR008279PEP-utilising enzyme, mobile domain
Gene3DG3DSA:3.50.30.103.199998990463549E-39367490IPR008279PEP-utilising enzyme, mobile domain
SuperFamilySSF520092.6e-37379507IPR008279PEP-utilising enzyme, mobile domain
Gene3DG3DSA:3.50.30.103e-39385508IPR008279PEP-utilising enzyme, mobile domain
PfamPF003919.000000000000003E-18400487IPR008279PEP-utilising enzyme, mobile domain
PfamPF003911.2e-20418505IPR008279PEP-utilising enzyme, mobile domain
PROSITEPS003700.0434445IPR018274PEP-utilising enzyme, mobile region, conserved site
PROSITEPS00370NA452463IPR018274PEP-utilising enzyme, mobile region, conserved site
SuperFamilySSF520092.6E-37460588IPR008279PEP-utilising enzyme, mobile domain
Gene3DG3DSA:3.50.30.103.199998990463549E-39466589IPR008279PEP-utilising enzyme, mobile domain
SuperFamilySSF520092.6e-37467595IPR008279PEP-utilising enzyme, mobile domain
Gene3DG3DSA:3.50.30.103e-39473596IPR008279PEP-utilising enzyme, mobile domain
SuperFamilySSF516216.3E-128494857IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
PfamPF003911.0E-17499586IPR008279PEP-utilising enzyme, mobile domain
PfamPF028967.599999999999977E-113502854IPR000121PEP-utilising enzyme
PfamPF003911.3e-20506593IPR008279PEP-utilising enzyme, mobile domain
SuperFamilySSF516216.3e-128512875IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
Gene3DG3DSA:3.20.20.603.199998990466496E-119516854IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
PfamPF028961e-115520872IPR000121PEP-utilising enzyme
PROSITEPS003700.0533544IPR018274PEP-utilising enzyme, mobile region, conserved site
Gene3DG3DSA:3.20.20.603.1e-119534872IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
PROSITEPS00370NA540551IPR018274PEP-utilising enzyme, mobile region, conserved site
SuperFamilySSF516216.3E-128593956IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
SuperFamilySSF516216.3e-128600963IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
PfamPF028969.699999999999891E-113601953IPR000121PEP-utilising enzyme
PfamPF028961.2e-115608960IPR000121PEP-utilising enzyme
Gene3DG3DSA:3.20.20.603.199998990466496E-119615953IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
Gene3DG3DSA:3.20.20.603.1e-119622960IPR015813Pyruvate/Phosphoenolpyruvate kinase, catalytic core
PROSITEPS007420.0746764IPR000121PEP-utilising enzyme
PROSITEPS00742NA764782IPR000121PEP-utilising enzyme
PROSITEPS007420.0845863IPR000121PEP-utilising enzyme
PROSITEPS00742NA852870IPR000121PEP-utilising enzyme