You are querying gene by "AT4G14400".

Locus: AT4G14400 Alias: ACD6

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae. 19144005
GeneOntology - response to salicylic acid stimulus 10488236

Basic gene information ( show / hide contents )

Locus AT4G14400 | Chromosome: 4 | Strand: +
Description response to salicylic acid stimulus
Alias
ACD6( alias )
Gene model
AT4G14400.2 | From: 8294448 | To: 8298598
AT4G14400.3 | From: 8294448 | To: 8298598
AT4G14400.1 | From: 8294448 | To: 8298598
Sequence
AT4G14400.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G14400.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT4G14400.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
cellular_component
membrane PMID: 16297071
biological_process
response to salicylic acid stimulus PMID: 10488236
cell death PMID: 10488236
defense response to bacterium, incompatible interaction PMID: 10488236
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
acd6-1 19144005 mutant
acd6-1 npr1-1 19144005 mutant
acd6-1 npr1-1 pad4-1 19144005 mutant
acd6-1 sid2-1 19144005 mutant
acd6-1 eds5-1 19144005 mutant
acd6-1 pad4-1 19144005 mutant
acd6-1 sup1-1 19144005 mutant
acd6-1 sup6-1 19144005 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G14400.1 
length: 2354 
miRNA : ath-miR406
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.015101 
 
position  90 
target 5' U   U         A  G     G 
           UGG UUGCGAUGG CA UUCUG  
           ACC AAUGUUAUC GU AAGAU  
miRNA  3' G   U                    
 
 
target: AT4G14400.1 
length: 2354 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -23.0 kcal/mol 
p-value: 0.072811 
 
position  599 
target 5' C     A              A 
           UGAAG GAGUGAGGGACUGA  
           ACUUU CUUGUUCUUUGACU  
miRNA  3'       G              A 
 
 
target: AT4G14400.2 
length: 2271 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -23.0 kcal/mol 
p-value: 0.070538 
 
position  516 
target 5' C     A              A 
           UGAAG GAGUGAGGGACUGA  
           ACUUU CUUGUUCUUUGACU  
miRNA  3'       G              A 
 
 
target: AT4G14400.3 
length: 2335 
miRNA : ath-miR406
length: 21 
 
mfe: -22.8 kcal/mol 
p-value: 0.014981 
 
position  84 
target 5' U   U         A  G     G 
           UGG UUGCGAUGG CA UUCUG  
           ACC AAUGUUAUC GU AAGAU  
miRNA  3' G   U                    
 
 
target: AT4G14400.3 
length: 2335 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -23.0 kcal/mol 
p-value: 0.072293 
 
position  580 
target 5' C     A              A 
           UGAAG GAGUGAGGGACUGA  
           ACUUU CUUGUUCUUUGACU  
miRNA  3'       G              A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_15924
AccessionTaxon
NP_001061756Oryza sativa Japonica Group
NP_001062865Oryza sativa Japonica Group
NP_001062901Oryza sativa Japonica Group
NP_001062927Oryza sativa Japonica Group
29929.m004575Ricinus communis
29929.m004576Ricinus communis
NP_001031584Arabidopsis thaliana
NP_171863Arabidopsis thaliana
NP_192253Arabidopsis thaliana
NP_192254Arabidopsis thaliana
NP_192255Arabidopsis thaliana
NP_192256Arabidopsis thaliana
NP_192257Arabidopsis thaliana
NP_192258Arabidopsis thaliana
NP_192259Arabidopsis thaliana
NP_193175Arabidopsis thaliana
NP_567285Arabidopsis thaliana
NP_567430 ( AT4G14400 )Arabidopsis thaliana
NP_849381Arabidopsis thaliana
NP_849382Arabidopsis thaliana
NP_974514Arabidopsis thaliana
NP_001059835Oryza sativa Japonica Group
NP_001059855Oryza sativa Japonica Group
29942.m000741Ricinus communis
29942.m000744Ricinus communis
NP_001062912Oryza sativa Japonica Group
NP_001062902Oryza sativa Japonica Group
NP_001067434Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS502970.011365IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.6E-3511318IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.206.39998633403594E-4022375IPR020683Ankyrin repeat-containing domain
SMARTSM002480.42000000191072623463IPR002110Ankyrin repeat
SuperFamilySSF484032.5E-3635384IPR020683Ankyrin repeat-containing domain
SMARTSM002483.69999997143879036897IPR002110Ankyrin repeat
PROSITEPS500880.06889IPR002110Ankyrin repeat
PROSITEPS502970.077431IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.206.39998633403594E-4088441IPR020683Ankyrin repeat-containing domain
SMARTSM002480.4200000019107262100129IPR002110Ankyrin repeat
SMARTSM002480.12000000217247245116145IPR002110Ankyrin repeat
SMARTSM002483.6999999714387903134163IPR002110Ankyrin repeat
PROSITEPS500880.0134155IPR002110Ankyrin repeat
SMARTSM00248220.00002175608174150182IPR002110Ankyrin repeat
SMARTSM002480.12000000217247245182211IPR002110Ankyrin repeat
SMARTSM002481199.999857031013195224IPR002110Ankyrin repeat
SMARTSM00248220.00002175608174216248IPR002110Ankyrin repeat
SMARTSM00248650.0000915568897229259IPR002110Ankyrin repeat
SMARTSM002481199.999857031013261290IPR002110Ankyrin repeat
SMARTSM0024810.999999970229565263293IPR002110Ankyrin repeat
SMARTSM00248650.0000915568897295325IPR002110Ankyrin repeat
SMARTSM00248909.9999260745269297326IPR002110Ankyrin repeat
SMARTSM0024810.999999970229565329359IPR002110Ankyrin repeat
SuperFamilySSF484035.2E-7330375IPR020683Ankyrin repeat-containing domain
SMARTSM0024810.999999970229565333362IPR002110Ankyrin repeat
SMARTSM00248909.9999260745269363392IPR002110Ankyrin repeat
SuperFamilySSF484035.2E-7396441IPR020683Ankyrin repeat-containing domain
SMARTSM0024810.999999970229565399428IPR002110Ankyrin repeat