You are querying gene by "AT4G13260".

Locus: AT4G13260 Alias: YUC2

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone biosynthesis YUCCA flavin monooxygenases 16818609
GeneOntology - auxin biosynthetic process 16818609

Basic gene information ( show / hide contents )

Locus AT4G13260 | Chromosome: 4 | Strand: -
Description YUCCA flavin monooxygenases
Alias
YUC2( alias )
Gene model
AT4G13260.1 | From: 7721614 | To: 7723985
Sequence
AT4G13260.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
NADP binding PMID:
flavin-containing monooxygenase activity PMID:
FAD binding PMID:
oxidoreductase activity PMID:
biological_process
auxin biosynthetic process PMID: 16818609
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
yuc1 yuc yuc4 yuc6 16818609 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G13260.1 
length: 1843 
miRNA : ath-miR774
length: 21 
 
mfe: -26.9 kcal/mol 
p-value: 0.008714 
 
position  754 
target 5' C   A   G        U  G  G 
           GAU GGC GUGUGGGU AU GA  
           CUA CCG UAUACCCA UG UU  
miRNA  3'         G        U  G    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51622
AccessionTaxon
NP_193062 ( AT4G13260 )Arabidopsis thaliana
NP_001044157Oryza sativa Japonica Group
29794.m003460Ricinus communis
29912.m005525Ricinus communis
NP_197944Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PRINTSPR003685.300002394679419E-72749IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR004692.79999889404114E-82749IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PfamPF007431.2000000000000004E-2330359IPR020946Flavin-containing monooxygenase-like
PRINTSPR003685.300002394679419E-7154163IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR004692.79999889404114E-8191215IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PRINTSPR003685.300002394679419E-7195220IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase