You are querying gene by "AT4G08920".

Locus: AT4G08920 Alias: BLU1

Hormone Evidence Function category Gene Description PMID
salicylic acidTransgenic Hormone signal transduction Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. 20053798
Mutant Hormone signal transduction Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. 20053798
auxinTransgenic Hormone signal transduction Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. 20133010
Mutant Hormone signal transduction Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. 20133010

Basic gene information ( show / hide contents )

Locus AT4G08920 | Chromosome: 4 | Strand: +
Description Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.
Alias
BLU1( alias )
CRY1( alias )
HY4( alias )
OOP2( alias )
Gene model
AT4G08920.1 | From: 5724119 | To: 5727250
Sequence
AT4G08920.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
blue light photoreceptor activity PMID: 8953250
ATP binding PMID: 12846824
protein kinase activity PMID: 12846824
protein homodimerization activity PMID: 15805487
cellular_component
nucleus PMID: 15610358
cytoplasm PMID: 18003924
biological_process
circadian rhythm PMID:
unidimensional cell growth PMID:
response to water deprivation PMID: 16093319
singlet oxygen-mediated programmed cell death PMID: 17075038
stomatal movement PMID: 16093319
response to blue light PMID:
electron transport PMID: 15774475
photomorphogenesis PMID:
blue light signaling pathway PMID: 10364413
protein amino acid autophosphorylation PMID: 12846824
anthocyanin metabolic process PMID: 17217468
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  salicylic acid     auxin  

[   salicylic acid   ]

Genotype PMID Type
cry1 20053798 mutant
CRY1ox 20053798 transgenic

[   auxin   ]

Genotype PMID Type
cry1 20053798 mutant
CRY1ox 20053798 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G08920.1 
length: 2551 
miRNA : ath-miR858
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.057834 
 
position  971 
target 5' C      C       A      G 
           AGGUCG GUGGGCA ACGAAG  
           UCCAGC UGUCUGU UGCUUU  
miRNA  3' U      U                
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10628
AccessionTaxon
e_gw1.12.43.1Physcomitrella patens subsp. patens
NP_001030703Arabidopsis thaliana
NP_566520Arabidopsis thaliana
206002Chlamydomonas reinhardtii
NP_001046243Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_Chr_05.00010023Ostreococcus tauri
29841.m002796Ricinus communis
NP_171935Arabidopsis thaliana
NP_567341 ( AT4G08920 )Arabidopsis thaliana
NP_849588Arabidopsis thaliana
185758Chlamydomonas reinhardtii
NP_001047200Oryza sativa Japonica Group
NP_001052950Oryza sativa Japonica Group
e_gw1.2.5.1Physcomitrella patens subsp. patens
29895.m000311Ricinus communis
29908.m006032Ricinus communis
e_gw1.2.7.1Physcomitrella patens subsp. patens
fgenesh1_pg.C_Chr_15.0001000071Ostreococcus tauri
fgenesh1_pg.scaffold_4623000001Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.40.50.6206.9e-3310138IPR014729Rossmann-like alpha/beta/alpha sandwich fold
SuperFamilySSF524253.1e-5910217IPR006050DNA photolyase, N-terminal
TIGRFAMTIGR02766013489IPR014134Cryptochrome, plant
PfamPF008753.6e-4114171IPR006050DNA photolyase, N-terminal
SuperFamilySSF481731.4e-99198497IPR005101DNA photolyase, FAD-binding/Cryptochrome, C-terminal
PfamPF034411.7e-86216490IPR005101DNA photolyase, FAD-binding/Cryptochrome, C-terminal
PRINTSPR001478.7e-11339355IPR002081Cryptochrome/DNA photolyase, class 1
PROSITEPS00394NA339351IPR018394Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal
PRINTSPR001478.7e-11359377IPR002081Cryptochrome/DNA photolyase, class 1
PROSITEPS00691NA359378IPR018394Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal
PRINTSPR001478.7e-11398412IPR002081Cryptochrome/DNA photolyase, class 1
PfamPF125461.3e-25519628IPR020978Cryptochrome C-terminal