You are querying gene by "AT4G08040".

Locus: AT4G08040 Alias: ACS11

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene biosynthetic process

Basic gene information ( show / hide contents )

Locus AT4G08040 | Chromosome: 4 | Strand: +
Description ethylene biosynthetic process
Alias
ACS11( alias )
Gene model
AT4G08040.1 | From: 4887109 | To: 4888936
Sequence
AT4G08040.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
1-aminocyclopropane-1-carboxylate synthase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
ethylene biosynthetic process PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G08040.1 
length: 1383 
miRNA : ath-miR824
length: 21 
 
mfe: -25.6 kcal/mol 
p-value: 0.015495 
 
position  80 
target 5' A               C     A 
           UCCUUUC CACGAGU GUUUA  
           AGGGAAG GUGUUUA CAGAU  
miRNA  3'         A       C       
 
 
target: AT4G08040.1 
length: 1383 
miRNA : ath-miR830*
length: 22 
 
mfe: -23.7 kcal/mol 
p-value: 0.006857 
 
position  950 
target 5' C                 A    A 
           GACC A ACUAUUUGGA GAGA  
           UUGG U UGAUAAACCU UUCU  
miRNA  3'      A U          C      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12167
AccessionTaxon
NP_564804Arabidopsis thaliana
170056Chlamydomonas reinhardtii
NP_001056689Oryza sativa Japonica Group
e_gw1.08.00.217.1Ostreococcus tauri
estExt_gwp_gw1.C_2350048Physcomitrella patens subsp. patens
30147.m014167Ricinus communis
30190.m011061Ricinus communis
NP_171655Arabidopsis thaliana
NP_191710Arabidopsis thaliana
30174.m008659Ricinus communis
30190.m011272Ricinus communis
NP_194350Arabidopsis thaliana
NP_849572Arabidopsis thaliana
NP_179866Arabidopsis thaliana
NP_190539Arabidopsis thaliana
NP_195491Arabidopsis thaliana
NP_201381Arabidopsis thaliana
NP_001051142Oryza sativa Japonica Group
29825.m000323Ricinus communis
30170.m013658Ricinus communis
NP_567330 ( AT4G08040 )Arabidopsis thaliana
NP_192867Arabidopsis thaliana
NP_001053637Oryza sativa Japonica Group
NP_001042279Oryza sativa Japonica Group
29912.m005403Ricinus communis
NP_199982Arabidopsis thaliana
e_gw1.376.41.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_46000126Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.90.1150.101.2000011745813984E-16165IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
SuperFamilySSF533838.0E-1051424IPR015424Pyridoxal phosphate-dependent transferase, major domain
PfamPF001551.3999999999999741E-9840419IPR004839Aminotransferase, class I/classII
PRINTSPR007534.60000044330866E-1034167IPR0011761-aminocyclopropane-1-carboxylate synthase
Gene3DG3DSA:3.40.640.106.399986334035939E-6373313IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
PRINTSPR007534.60000044330866E-1037490IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007534.60000044330866E-103111131IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007534.60000044330866E-103133154IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007534.60000044330866E-103187211IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007534.60000044330866E-103223246IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007534.60000044330866E-103258282IPR0011761-aminocyclopropane-1-carboxylate synthase
PROSITEPS001050.0264277IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding site
PRINTSPR007534.60000044330866E-103290313IPR0011761-aminocyclopropane-1-carboxylate synthase
Gene3DG3DSA:3.90.1150.103.3999997243771873E-9314429IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2