You are querying gene by "AT4G03550".

Locus: AT4G03550 Alias: ATGSL05

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - salicylic acid mediated signaling pathway 10677553

Basic gene information ( show / hide contents )

Locus AT4G03550 | Chromosome: 4 | Strand: +
Description salicylic acid mediated signaling pathway
Alias
ATGSL05( alias )
ATGSL5( alias )
GSL05( alias )
GSL5( alias )
PMR4( alias )
Gene model
AT4G03550.1 | From: 1573346 | To: 1579694
Sequence
AT4G03550.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transferase activity, transferring glycosyl groups PMID:
1,3-beta-glucan synthase activity PMID:
cellular_component
1,3-beta-glucan synthase complex PMID:
plasma membrane PMID: 16618929
biological_process
salicylic acid mediated signaling pathway PMID: 10677553
response to fungus PMID: 10677553
1,3-beta-glucan biosynthetic process PMID:
defense response signaling pathway, resistance gene-dependent PMID: 10677553
leaf morphogenesis PMID: 10677553
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G03550.1 
length: 5835 
miRNA : ath-miR406
length: 21 
 
mfe: -24.1 kcal/mol 
p-value: 0.019640 
 
position  5371 
target 5' A      C            U 
           UGG UU CAGUAGCGUUCU  
           ACC AA GUUAUCGUAAGA  
miRNA  3' G   U  U            U 
 
 
target: AT4G03550.1 
length: 5835 
miRNA : ath-miR413
length: 21 
 
mfe: -27.4 kcal/mol 
p-value: 0.037885 
 
position  3503 
target 5' C   G    G           A 
           UGC GGAA AGGAGAGACUG  
           ACG UCUU UUCUCUUUGAU  
miRNA  3' C        G           A 
 
 
target: AT4G03550.1 
length: 5835 
miRNA : ath-miR834
length: 21 
 
mfe: -37.1 kcal/mol 
p-value: 0.001687 
 
position  311 
target 5' G                   U 
           UGCCGCCGCUGCUGCU CU  
           AUGGUGGCGAUGACGA GG  
miRNA  3' A                U  U 
 
 
target: AT4G03550.1 
length: 5835 
miRNA : ath-miR846
length: 21 
 
mfe: -24.0 kcal/mol 
p-value: 0.037973 
 
position  5191 
target 5' G      C         C    U 
           AGUUCA GCAUUUCAG UUCA  
           UUAAGU CGUGAAGUU AAGU  
miRNA  3'        U              U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11334
AccessionTaxon
NP_001154712Arabidopsis thaliana
NP_172136Arabidopsis thaliana
NP_187372Arabidopsis thaliana
NP_191469Arabidopsis thaliana
NP_196804Arabidopsis thaliana
NP_563743Arabidopsis thaliana
NP_849953Arabidopsis thaliana
NP_850178Arabidopsis thaliana
NP_850271Arabidopsis thaliana
NP_001043251Oryza sativa Japonica Group
NP_001043253Oryza sativa Japonica Group
NP_001044278Oryza sativa Japonica Group
NP_001048628Oryza sativa Japonica Group
NP_001048779Oryza sativa Japonica Group
NP_001048837Oryza sativa Japonica Group
NP_001056983Oryza sativa Japonica Group
e_gw1.07.00.35.1Ostreococcus tauri
e_gw1.13.32.1Physcomitrella patens subsp. patens
e_gw1.160.55.1Physcomitrella patens subsp. patens
e_gw1.199.78.1Physcomitrella patens subsp. patens
e_gw1.67.119.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_400112Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_130334Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1450031Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_670134Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_880098Physcomitrella patens subsp. patens
28035.m000358Ricinus communis
28035.m000359Ricinus communis
29691.m000282Ricinus communis
29734.m000419Ricinus communis
29983.m003192Ricinus communis
30226.m002023Ricinus communis
NP_188075Arabidopsis thaliana
NP_192264 ( AT4G03550 )Arabidopsis thaliana
NP_198503Arabidopsis thaliana
NP_567278Arabidopsis thaliana
143511Chlamydomonas reinhardtii
147446Chlamydomonas reinhardtii
NP_001043829Oryza sativa Japonica Group
NP_001048627Oryza sativa Japonica Group
NP_001058646Oryza sativa Japonica Group
e_gw1.18.9.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3790031Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_660051Physcomitrella patens subsp. patens
29759.m000281Ricinus communis
29851.m002416Ricinus communis
29983.m003191Ricinus communis
30147.m013812Ricinus communis
NP_001056596Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023640.08751654IPR003440Glycosyl transferase, family 48