You are querying gene by "AT4G02780".

Locus: AT4G02780 Alias: ABC33

Hormone Evidence Function category Gene Description PMID
gibberellinMutant Hormone biosynthesis ent-copalyl diphosphate synthase 14871311 15155881
GeneOntology - gibberellic acid mediated signaling 7994182

Basic gene information ( show / hide contents )

Locus AT4G02780 | Chromosome: 4 | Strand: -
Description ent-copalyl diphosphate synthase
Alias
ABC33( alias )
ATCPS1( alias )
GA1( alias )
Gene model
AT4G02780.1 | From: 1237767 | To: 1244813
Sequence
AT4G02780.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
magnesium ion binding PMID: 17384166
ent-copalyl diphosphate synthase activity PMID: 17384166
cellular_component
chloroplast PMID: 7994182
biological_process
gibberellic acid mediated signaling PMID: 7994182
gibberellin biosynthetic process PMID: 7994182
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Diterpenoid biosynthesis ent-copalyl diphosphate synthase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   gibberellin   ]

Genotype PMID Type
rga-24 gai-t6 ga1-3 9215910 mutant
ga1-3 rga-24 9215910 mutant
ga1-3 16652976 12297643 mutant
ga1-6 16652976 12297643 mutant
ga1-3 rga-t2 gai-t6 rgl2-1 14973286 mutant
ga1-3 rga-t2 gai-t6 rgl2-1 rgl1-1 14973286 17220364 mutant
ga1-3 gai-t6 16034591 mutant
ga1-3 rga-t2 14871311 15155881 9215910 mutant
ga1-3 rgl1-1 16034591 mutant
ga1-3 rgl2-1 16034591 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G02780.1 
length: 2570 
miRNA : ath-miR169g*
length: 21 
 
mfe: -35.4 kcal/mol 
p-value: 0.001032 
 
position  1969 
target 5' A                     G 
           GGCC A GUCGGCUUGCCGGA  
           UCGG U CAGUUGAACGGCCU  
miRNA  3'      U C                
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_44465
AccessionTaxon
NP_192187 ( AT4G02780 )Arabidopsis thaliana
NP_001046550Oryza sativa Japonica Group
NP_001052171Oryza sativa Japonica Group
estExt_fgenesh2_pg.C_1300003Physcomitrella patens subsp. patens
29647.m002075Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF482391.5E-37113326IPR008930Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
PfamPF013975.699999999999981E-49280478IPR001906Terpene synthase-like
SuperFamilySSF482399.9E-70281503IPR008930Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
SuperFamilySSF485761.5E-56517802IPR008949Terpenoid synthase
PfamPF039363.6000000000000226E-37521762IPR005630Terpene synthase, metal-binding domain
Gene3DG3DSA:1.10.600.103.0999994589936886E-8532595IPR008949Terpenoid synthase