You are querying gene by "AT4G00880".

Locus: AT4G00880 Alias: AT4G00880

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus

Basic gene information ( show / hide contents )

Locus AT4G00880 | Chromosome: 4 | Strand: -
Description response to auxin stimulus
Alias
AT4G00880( alias )
Gene model
AT4G00880.1 | From: 366373 | To: 367274
Sequence
AT4G00880.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
response to auxin stimulus PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT4G00880.1 
length: 902 
miRNA : ath-miR2939
length: 21 
 
mfe: -25.8 kcal/mol 
p-value: 0.001213 
 
position  674 
target 5' U        U            U 
           GUGGCUUG UGUUGU UGUUG  
           UACCGAAU ACAACA GCAAU  
miRNA  3'          C      C       
 
 
target: AT4G00880.1 
length: 902 
miRNA : ath-miR870
length: 21 
 
mfe: -25.5 kcal/mol 
p-value: 0.006647 
 
position  493 
target 5' C       A            U 
           GAUCGAG AAACACUAGAUU  
           CUAGCUU UUUGUGGUUUAA  
miRNA  3'         C            U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51477
AccessionTaxon
NP_182192Arabidopsis thaliana
NP_191749Arabidopsis thaliana
NP_200171Arabidopsis thaliana
NP_567196 ( AT4G00880 )Arabidopsis thaliana
NP_001058573Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF025193.000000000000004E-262093IPR003676Auxin responsive SAUR protein