You are querying gene by "AT4G00120".

Locus: AT4G00120 Alias: EDA33

Hormone Evidence Function category Gene Description PMID
auxinTransgenic Hormone transportion INDEHISCENT (IND); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix dimerisation region bHLH (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: HEC3 (HECATE 3); DNA binding / transcription factor (TAIR:AT5G09750.1); Has 1277 Blast hits to 1277 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 19478783
Mutant Hormone transportion INDEHISCENT (IND); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix dimerisation region bHLH (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: HEC3 (HECATE 3); DNA binding / transcription factor (TAIR:AT5G09750.1); Has 1277 Blast hits to 1277 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 19478783

Basic gene information ( show / hide contents )

Locus AT4G00120 | Chromosome: 4 | Strand: -
Description INDEHISCENT (IND); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Basic helix-loop-helix dimerisation region bHLH (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: HEC3 (HECATE 3); DNA binding / transcription factor (TAIR:AT5G09750.1); Has 1277 Blast hits to 1277 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Alias
EDA33( alias )
IND( alias )
Gene model
AT4G00120.1 | From: 41665 | To: 43197
Sequence
AT4G00120.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID:
cellular_component
nucleus PMID:
biological_process
polar nucleus fusion PMID: 15634699
regulation of transcription PMID: 11118137
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
ind-2 19478783 mutant
35S:IND 19478783 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

No related Ortholog Groups information for this gene.

DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF474591.2E-10111192IPR011598Helix-loop-helix DNA-binding
PROSITEPS508880.0112168IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003539.699996633901118E-12124173IPR001092Helix-loop-helix DNA-binding domain
PfamPF000100.0020999999999999986126167IPR001092Helix-loop-helix DNA-binding domain