You are querying gene by "AT3G61970".

Locus: AT3G61970 Alias: NGA2

Hormone Evidence Function category Gene Description PMID
auxinTransgenic Hormone biosynthesis NGATHA2 (NGA2); FUNCTIONS IN: transcription factor activity; INVOLVED IN: flower development, leaf development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: NGA1 (NGATHA1); transcription factor (TAIR:AT2G46870.1); Has 732 Blast hits to 730 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 732; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 19435937
Mutant Hormone biosynthesis NGATHA2 (NGA2); FUNCTIONS IN: transcription factor activity; INVOLVED IN: flower development, leaf development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: NGA1 (NGATHA1); transcription factor (TAIR:AT2G46870.1); Has 732 Blast hits to 730 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 732; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 19435937

Basic gene information ( show / hide contents )

Locus AT3G61970 | Chromosome: 3 | Strand: +
Description NGATHA2 (NGA2); FUNCTIONS IN: transcription factor activity; INVOLVED IN: flower development, leaf development; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: NGA1 (NGATHA1); transcription factor (TAIR:AT2G46870.1); Has 732 Blast hits to 730 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 732; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Alias
NGA2( alias )
Gene model
AT3G61970.1 | From: 22962438 | To: 22963826
Sequence
AT3G61970.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
cellular_component_unknown PMID:
biological_process
flower development PMID: 16603651
leaf development PMID: 16603651
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
nga1 nga2 nga3 nga4 19435937 mutant
amiR-NGA 19435937 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G61970.1 
length: 1389 
miRNA : ath-miR1886.3
length: 21 
 
mfe: -19.8 kcal/mol 
p-value: 0.037198 
 
position  1161 
target 5' C     U               A 
           AGUGA GAU GAGUCUUUAGU  
           UCAUU CUA UUUAGAAAUUA  
miRNA  3'           C           A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37260
AccessionTaxon
NP_171611Arabidopsis thaliana
NP_192059Arabidopsis thaliana
NP_566089Arabidopsis thaliana
NP_001047754Oryza sativa Japonica Group
NP_001048792Oryza sativa Japonica Group
30068.m002615Ricinus communis
30076.m004471Ricinus communis
NP_191756 ( AT3G61970 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023629.3e-3123128IPR003340Transcriptional factor B3
PROSITEPS5086314.48023129IPR003340Transcriptional factor B3