You are querying gene by "AT3G61850".

Locus: AT3G61850 Alias: DAG1

Hormone Evidence Function category Gene Description PMID
GibberellinMutant Hormone signal transduction Zinc finger transcription factor of the Dof family involved in the control of seed germination. 19874540

Basic gene information ( show / hide contents )

Locus AT3G61850 | Chromosome: 3 | Strand: +
Description Zinc finger transcription factor of the Dof family involved in the control of seed germination.
Alias
DAG1( alias )
Gene model
AT3G61850.1 | From: 22906243 | To: 22908533
AT3G61850.2 | From: 22906494 | To: 22908533
AT3G61850.3 | From: 22906704 | To: 22908533
Sequence
AT3G61850.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G61850.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G61850.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 16581911
biological_process
seed germination PMID: 10640273
response to red or far red light PMID: 11842145
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   gibberellin   ]

Genotype PMID Type
dag1-1 19874540 mutant
dag1 pil5 19874540 mutant
dag1 phyB-9 19874540 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G61850.1 
length: 1526 
miRNA : ath-miR865-5p
length: 21 
 
mfe: -21.7 kcal/mol 
p-value: 0.035874 
 
position  1455 
target 5' A     G       U      C 
           UCAGU AGAUCUG AUUCAU  
           AGUUA UCUAGGU UAAGUA  
miRNA  3' G     A       U        
 
 
target: AT3G61850.2 
length: 1956 
miRNA : ath-miR865-5p
length: 21 
 
mfe: -21.7 kcal/mol 
p-value: 0.050388 
 
position  1885 
target 5' A     G       U      C 
           UCAGU AGAUCUG AUUCAU  
           AGUUA UCUAGGU UAAGUA  
miRNA  3' G     A       U        
 
 
target: AT3G61850.3 
length: 1401 
miRNA : ath-miR865-5p
length: 21 
 
mfe: -21.7 kcal/mol 
p-value: 0.031776 
 
position  1330 
target 5' A     G       U      C 
           UCAGU AGAUCUG AUUCAU  
           AGUUA UCUAGGU UAAGUA  
miRNA  3' G     A       U        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_45044
AccessionTaxon
NP_001031549Arabidopsis thaliana
NP_001078327Arabidopsis thaliana
NP_001118885Arabidopsis thaliana
NP_182182Arabidopsis thaliana
NP_191744 ( AT3G61850 )Arabidopsis thaliana
NP_850734Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
ProDomPD0074780.057116IPR003851Zinc finger, Dof-type
PfamPF027011.4999999999999956E-3358118IPR003851Zinc finger, Dof-type
PROSITEPS508840.062116IPR003851Zinc finger, Dof-type
PROSITEPS013610.064100IPR003851Zinc finger, Dof-type
ProDomPD0074780.069128IPR003851Zinc finger, Dof-type
PfamPF027012.1e-3670130IPR003851Zinc finger, Dof-type
PfamPF027011.9000000000000044E-3370130IPR003851Zinc finger, Dof-type
PROSITEPS5088428.70574128IPR003851Zinc finger, Dof-type
PROSITEPS508840.074128IPR003851Zinc finger, Dof-type
PROSITEPS01361NA76112IPR003851Zinc finger, Dof-type
PROSITEPS013610.076112IPR003851Zinc finger, Dof-type