You are querying gene by "AT3G59220".

Locus: AT3G59220 Alias: ATPIRIN1

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 12837948

Basic gene information ( show / hide contents )

Locus AT3G59220 | Chromosome: 3 | Strand: +
Description response to abscisic acid stimulus
Alias
ATPIRIN1( alias )
PRN( alias )
PRN1( alias )
Gene model
AT3G59220.1 | From: 21905111 | To: 21906600
Sequence
AT3G59220.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
calmodulin binding PMID: 11782485
cellular_component
cellular_component_unknown PMID:
biological_process
response to low fluence blue light PMID:
response to abscisic acid stimulus PMID: 12837948
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G59220.1 
length: 1057 
miRNA : ath-miR393a
length: 22 
 
mfe: -35.1 kcal/mol 
p-value: 0.000118 
 
position  832 
target 5' U  U                 U  U 
           GG UCAGUGUGGUCCCUUUG GA  
           CC AGUUACGCUAGGGAAAC CU  
miRNA  3'    U                      
 
 
target: AT3G59220.1 
length: 1057 
miRNA : ath-miR393b
length: 22 
 
mfe: -35.1 kcal/mol 
p-value: 0.000518 
 
position  832 
target 5' U  U                 U  U 
           GG UCAGUGUGGUCCCUUUG GA  
           CC AGUUACGCUAGGGAAAC CU  
miRNA  3'    U                      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11478
AccessionTaxon
NP_191481 ( AT3G59220 )Arabidopsis thaliana
NP_850385Arabidopsis thaliana
149072Chlamydomonas reinhardtii
NP_001051876Oryza sativa Japonica Group
estExt_gwp_GeneWisePlus.C_Chr_09.00010003Ostreococcus tauri
e_gw1.84.152.1Physcomitrella patens subsp. patens
30149.m000229Ricinus communis
NP_175474Arabidopsis thaliana
NP_001063515Oryza sativa Japonica Group
NP_191485Arabidopsis thaliana
e_gw1.01.00.464.1Ostreococcus tauri
NP_001061644Oryza sativa Japonica Group
27613.m000619Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF511823.9e-828285IPR011051Cupin, RmlC-type
PIRPIRSF0062324.1e-11710284IPR012093Pirin
PfamPF026781.2e-3036121IPR003829Pirin, N-terminal
PANTHERPTHR139031.3e-10160286IPR012093Pirin
PfamPF057264.9e-34174280IPR008778Pirin, C-terminal