You are querying gene by "AT3G59060".

Locus: AT3G59060 Alias: PIF5

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene biosynthetic process 18065691

Basic gene information ( show / hide contents )

Locus AT3G59060 | Chromosome: 3 | Strand: -
Description ethylene biosynthetic process
Alias
PIF5( alias )
PIL6( alias )
Gene model
AT3G59060.1 | From: 21838982 | To: 21841484
AT3G59060.2 | From: 21838955 | To: 21841484
AT3G59060.3 | From: 21838955 | To: 21841074
AT3G59060.4 | From: 21838955 | To: 21841484
Sequence
AT3G59060.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G59060.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G59060.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT3G59060.4 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID:
cellular_component
nucleus PMID:
biological_process
ethylene biosynthetic process PMID: 18065691
red, far-red light phototransduction PMID: 18065691
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_22194
AccessionTaxon
NP_001051465Oryza sativa Japonica Group
NP_001050735Oryza sativa Japonica Group
NP_001030889Arabidopsis thaliana
NP_001030890Arabidopsis thaliana
NP_191465Arabidopsis thaliana
NP_565991Arabidopsis thaliana
NP_850381Arabidopsis thaliana
NP_851021 ( AT3G59060 )Arabidopsis thaliana
NP_001058876Oryza sativa Japonica Group
NP_001067246Oryza sativa Japonica Group
NP_179608Arabidopsis thaliana
NP_849996Arabidopsis thaliana
30204.m001816Ricinus communis
151650Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:4.10.280.103.2e-09253311IPR011598Helix-loop-helix DNA-binding
PROSITEPS5088816.617253306IPR001092Helix-loop-helix DNA-binding domain
Gene3DG3DSA:4.10.280.103.3999997243771873E-9253311IPR011598Helix-loop-helix DNA-binding
PROSITEPS508880.0253306IPR001092Helix-loop-helix DNA-binding domain
SuperFamilySSF474592.9e-19254338IPR011598Helix-loop-helix DNA-binding
SuperFamilySSF474592.9E-19254338IPR011598Helix-loop-helix DNA-binding
PfamPF000102.9e-15260306IPR001092Helix-loop-helix DNA-binding domain
PfamPF000102.3000000000000007E-12260306IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003536.1e-18262311IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003535.200000890033361E-18262311IPR001092Helix-loop-helix DNA-binding domain