You are querying gene by "AT3G58680".

Locus: AT3G58680 Alias: ATMBF1B

Hormone Evidence Function category Gene Description PMID
ethyleneTransgenic Hormone signal transduction One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated. 19783066
Mutant Hormone signal transduction One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated. 19783066
GeneOntology - response to ethylene stimulus
abscisic acidTransgenic Hormone signal transduction One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated. 19783066
Mutant Hormone signal transduction One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated. 19783066

Basic gene information ( show / hide contents )

Locus AT3G58680 | Chromosome: 3 | Strand: +
Description response to ethylene stimulus
Alias
ATMBF1B( alias )
MBF1B( alias )
Gene model
AT3G58680.1 | From: 21718253 | To: 21719888
Sequence
AT3G58680.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription coactivator activity PMID: 14988493
cellular_component
nucleus PMID: 15610358
nucleolus PMID: 16283071
cytoplasm PMID: 15610358
biological_process
positive regulation of transcription PMID: 14988493
transcription PMID:
response to ethylene stimulus PMID:
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Other transcription related proteins putative transcription factor
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  ethylene     abscisic acid  

[   ethylene   ]

Genotype PMID Type
abc- 19783066 mutant
abc-+c No comment.
abc-C 19783066 transgenic

[   abscisic acid   ]

Genotype PMID Type
abc- 19783066 mutant
abc-C 19783066 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G58680.1 
length: 806 
miRNA : ath-miR870
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.008637 
 
position  197 
target 5' C       C        U    A 
           GUCGAAG GGCGCCGA AUUG  
           UAGCUUC UUGUGGUU UAAU  
miRNA  3' C       U               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11324
AccessionTaxon
NP_191427 ( AT3G58680 )Arabidopsis thaliana
NP_565981Arabidopsis thaliana
76570Chlamydomonas reinhardtii
NP_001061647Oryza sativa Japonica Group
e_gw1.15.00.298.1Ostreococcus tauri
estExt_gwp_gw1.C_350181Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_960054Physcomitrella patens subsp. patens
29912.m005549Ricinus communis
NP_189093Arabidopsis thaliana
27894.m000799Ricinus communis
NP_001057974Oryza sativa Japonica Group
estExt_fgenesh1_kg.C_1410005Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF085237.499999999999999E-24979IPR013729Multiprotein bridging factor 1, N-terminal
SuperFamilySSF474136.8E-982135IPR010982Lambda repressor-like, DNA-binding
SMARTSM005306.899999633797004E-1286141IPR001387Helix-turn-helix type 3
PfamPF013815.000000000000002E-1087137IPR001387Helix-turn-helix type 3
PROSITEPS509430.087141IPR001387Helix-turn-helix type 3