You are querying gene by "AT3G55610".

Locus: AT3G55610 Alias: P5CS2

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 9351242

Basic gene information ( show / hide contents )

Locus AT3G55610 | Chromosome: 3 | Strand: -
Description response to abscisic acid stimulus
Alias
P5CS2( alias )
Gene model
AT3G55610.1 | From: 20634999 | To: 20640072
Sequence
AT3G55610.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
glutamate-5-semialdehyde dehydrogenase activity PMID:
glutamate 5-kinase activity PMID:
catalytic activity PMID:
oxidoreductase activity PMID:
cellular_component
cytoplasm PMID:
biological_process
proline biosynthetic process PMID: 9351242
hyperosmotic salinity response PMID: 9351242
response to abscisic acid stimulus PMID: 9351242
KEGG pathway This gene participates in 2 pathways:
Pathway Enzyme
Urea cycle and metabolism of amino groups glutamate-5-semialdehyde dehydrogenase
Urea cycle and metabolism of amino groups glutamate 5-kinase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G55610.1 
length: 2543 
miRNA : ath-miR867
length: 21 
 
mfe: -23.5 kcal/mol 
p-value: 0.017526 
 
position  1246 
target 5' A                A    A 
           UCC AAUAGGCCGUGU UUAA  
           AGG UUAUUUGGUACA AGUU  
miRNA  3' A   A                   
 
 
target: AT3G55610.2 
length: 2008 
miRNA : ath-miR867
length: 21 
 
mfe: -23.5 kcal/mol 
p-value: 0.014062 
 
position  1246 
target 5' A                A    A 
           UCC AAUAGGCCGUGU UUAA  
           AGG UUAUUUGGUACA AGUU  
miRNA  3' A   A                   
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11104
AccessionTaxon
NP_001118846Arabidopsis thaliana
NP_181510Arabidopsis thaliana
NP_191120 ( AT3G55610 )Arabidopsis thaliana
NP_973641Arabidopsis thaliana
130812Chlamydomonas reinhardtii
NP_001044802Oryza sativa Japonica Group
NP_001055723Oryza sativa Japonica Group
gw1.10.00.92.1Ostreococcus tauri
e_gw1.22.25.1Physcomitrella patens subsp. patens
30143.m001194Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PIRPIRSF03642901720IPR005766Delta l-pyrroline-5-carboxylate synthetase
Gene3DG3DSA:3.40.1160.104.900010277824081E-178282IPR001048Aspartate/glutamate/uridylate kinase
TIGRFAMTIGR010920.08622IPR005766Delta l-pyrroline-5-carboxylate synthetase
Gene3DG3DSA:3.40.1160.104.7e-178282IPR001048Aspartate/glutamate/uridylate kinase
TIGRFAMTIGR0109208720IPR005766Delta l-pyrroline-5-carboxylate synthetase
SuperFamilySSF536331.3000049540732416E-5214281IPR001048Aspartate/glutamate/uridylate kinase
SuperFamilySSF536331.3e-5214281IPR001048Aspartate/glutamate/uridylate kinase
PfamPF006961.3000000000000007E-3215260IPR001048Aspartate/glutamate/uridylate kinase
TIGRFAMTIGR010279.70001793430487E-2115342IPR005715Glutamate 5-kinase, ProB-related
PfamPF006962.3e-3515260IPR001048Aspartate/glutamate/uridylate kinase
TIGRFAMTIGR010271.7e-2415342IPR005715Glutamate 5-kinase, ProB-related
PRINTSPR004741.7999975402237506E-565266IPR001057Glutamate 5-kinase
PRINTSPR004743.1e-565266IPR001057Glutamate 5-kinase
PRINTSPR004741.7999975402237506E-5696124IPR001057Glutamate 5-kinase
PRINTSPR004743.1e-5696124IPR001057Glutamate 5-kinase
PRINTSPR004741.7999975402237506E-56136157IPR001057Glutamate 5-kinase
PRINTSPR004743.1e-56136157IPR001057Glutamate 5-kinase
PRINTSPR004741.7999975402237506E-56175202IPR001057Glutamate 5-kinase
PRINTSPR004743.1e-56175202IPR001057Glutamate 5-kinase
PROSITEPS009020.0232249IPR019797Glutamate 5-kinase, conserved site
PROSITEPS00902NA232249IPR019797Glutamate 5-kinase, conserved site
PRINTSPR004741.7999975402237506E-56234254IPR001057Glutamate 5-kinase
PRINTSPR004743.1e-56234254IPR001057Glutamate 5-kinase
Gene3DG3DSA:3.40.605.101.3000049540732414E-55280507IPR016162Aldehyde dehydrogenase, N-terminal
Gene3DG3DSA:3.40.605.101.3e-55280507IPR016162Aldehyde dehydrogenase, N-terminal
SuperFamilySSF537201.600002406959863E-62291621IPR016161Aldehyde/histidinol dehydrogenase
SuperFamilySSF537201.1e-95291700IPR016161Aldehyde/histidinol dehydrogenase
PfamPF001710.013999999999999999298564IPR015590Aldehyde dehydrogenase
TIGRFAMTIGR004074.5e-160302690IPR000965Gamma-glutamyl phosphate reductase GPR
Gene3DG3DSA:3.40.309.109.199984144203112E-27508621IPR016163Aldehyde dehydrogenase, C-terminal
Gene3DG3DSA:3.40.309.103.2e-64508681IPR016163Aldehyde dehydrogenase, C-terminal
PROSITEPS01223NA607628IPR020593Gamma-glutamyl phosphate reductase GPR, conserved site