You are querying gene by "AT3G55530".

Locus: AT3G55530 Alias: SDIR1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction A RING finger E3 ligase, SALT-AND DROUGHT-INDUCED RING FINGER1, encodes a protein of 273 amino acids with a predicted molecular mass of 30.18 kD. 17573536
GeneOntology - response to abscisic acid stimulus 17573536

Basic gene information ( show / hide contents )

Locus AT3G55530 | Chromosome: 3 | Strand: -
Description A RING finger E3 ligase, SALT-AND DROUGHT-INDUCED RING FINGER1, encodes a protein of 273 amino acids with a predicted molecular mass of 30.18 kD.
Alias
SDIR1( alias )
Gene model
AT3G55530.1 | From: 20606105 | To: 20608582
Sequence
AT3G55530.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein binding PMID:
zinc ion binding PMID:
ubiquitin-protein ligase activity PMID: 17573536
cellular_component
intracellular membrane-bounded organelle PMID: 17573536
microsome PMID: 17573536
biological_process
positive regulation of abscisic acid mediated signaling PMID: 17573536
response to water deprivation PMID: 17573536
response to salt stress PMID: 17573536
response to abscisic acid stimulus PMID: 17573536
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
sdir1-1 17573536 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT3G55530AT4G26080negativeotherN/Amutance17573536

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27226
AccessionTaxon
NP_191112 ( AT3G55530 )Arabidopsis thaliana
NP_001049696Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_1240054Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_900162Physcomitrella patens subsp. patens
27568.m000263Ricinus communis
29751.m001903Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF000971.7999999999999998E-4211251IPR018957Zinc finger, C3HC4 RING-type
SMARTSM001845.699997087839526E-9211251IPR001841Zinc finger, RING-type
PROSITEPS500890.0211252IPR001841Zinc finger, RING-type