You are querying gene by "AT3G53480".

Locus: AT3G53480 Alias: ATPDR9

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. 18832358
auxinMutant Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. 20498067

Basic gene information ( show / hide contents )

Locus AT3G53480 | Chromosome: 3 | Strand: +
Description Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells.
Alias
ATPDR9( alias )
PDR9( alias )
Gene model
AT3G53480.1 | From: 19836285 | To: 19842775
Sequence
AT3G53480.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
ATPase activity, coupled to transmembrane movement of substances PMID:
cellular_component
plasma membrane PMID: 16618929
biological_process
multidrug transport PMID: 16506311
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  abscisic acid     auxin  

[   abscisic acid   ]

Genotype PMID Type
ibr5-3 19000167 mutant
ibr5 pdr8-115 19648296 mutant
ibr5 pdr8-2 19648296 mutant

[   auxin   ]

Genotype PMID Type
pdr9-2 19648296 mutant
pis1-1 20498067 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT3G53480.1 
length: 4565 
miRNA : ath-miR776
length: 21 
 
mfe: -25.3 kcal/mol 
p-value: 0.028741 
 
position  2805 
target 5' U               A     A 
           ACAUCGA AGGAGAC UUAGA  
           UGUAGUU UCUUCUG AAUCU  
miRNA  3' U       A               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10034
AccessionTaxon
0400010374Ostreococcus tauri
0600010173Ostreococcus tauri
143982Chlamydomonas reinhardtii
e_gw1.65.47.1Physcomitrella patens subsp. patens
28219.m000091Ricinus communis
29738.m001021Ricinus communis
29827.m002659Ricinus communis
NP_194472Arabidopsis thaliana
NP_564383Arabidopsis thaliana
180799Chlamydomonas reinhardtii
NP_001049014Oryza sativa Japonica Group
gw1.05.00.55.1Ostreococcus tauri
e_gw1.169.25.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2700057Physcomitrella patens subsp. patens
79831Chlamydomonas reinhardtii
NP_001041878Oryza sativa Japonica Group
e_gw1.10.00.120.1Ostreococcus tauri
gw1.10.00.71.1Ostreococcus tauri
NP_172973Arabidopsis thaliana
NP_173005Arabidopsis thaliana
NP_176196Arabidopsis thaliana
NP_176867Arabidopsis thaliana
NP_180259Arabidopsis thaliana
NP_180555Arabidopsis thaliana
NP_181179Arabidopsis thaliana
NP_181265Arabidopsis thaliana
NP_190916 ( AT3G53480 )Arabidopsis thaliana
NP_193258Arabidopsis thaliana
NP_566543Arabidopsis thaliana
NP_680692Arabidopsis thaliana
NP_680693Arabidopsis thaliana
NP_680694Arabidopsis thaliana
NP_683617Arabidopsis thaliana
103211Chlamydomonas reinhardtii
115842Chlamydomonas reinhardtii
131711Chlamydomonas reinhardtii
60710Chlamydomonas reinhardtii
NP_001042955Oryza sativa Japonica Group
NP_001043538Oryza sativa Japonica Group
NP_001043539Oryza sativa Japonica Group
NP_001043541Oryza sativa Japonica Group
NP_001044111Oryza sativa Japonica Group
NP_001046259Oryza sativa Japonica Group
NP_001046678Oryza sativa Japonica Group
NP_001057850Oryza sativa Japonica Group
NP_001061702Oryza sativa Japonica Group
NP_001066875Oryza sativa Japonica Group
NP_001068174Oryza sativa Japonica Group
gw1.07.00.7.1Ostreococcus tauri
e_gw1.15.314.1Physcomitrella patens subsp. patens
e_gw1.160.7.1Physcomitrella patens subsp. patens
e_gw1.170.3.1Physcomitrella patens subsp. patens
e_gw1.23.7.1Physcomitrella patens subsp. patens
e_gw1.3.69.1Physcomitrella patens subsp. patens
e_gw1.36.207.1Physcomitrella patens subsp. patens
e_gw1.72.203.1Physcomitrella patens subsp. patens
e_gw1.72.206.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_3750035Physcomitrella patens subsp. patens
estExt_Genewise1.C_590033Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_120016Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_150083Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1800028Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_536000002Physcomitrella patens subsp. patens
27496.m000097Ricinus communis
29588.m000881Ricinus communis
29588.m000882Ricinus communis
29588.m000883Ricinus communis
29588.m000884Ricinus communis
29681.m001339Ricinus communis
29766.m000121Ricinus communis
29791.m000550Ricinus communis
29791.m000551Ricinus communis
29848.m004673Ricinus communis
29889.m003385Ricinus communis
29901.m000408Ricinus communis
29912.m005565Ricinus communis
29912.m005566Ricinus communis
29912.m005567Ricinus communis
29912.m005568Ricinus communis
29912.m005569Ricinus communis
29953.m000435Ricinus communis
30128.m008881Ricinus communis
30131.m006867Ricinus communis
30146.m003511Ricinus communis
30146.m003512Ricinus communis
30146.m003513Ricinus communis
30146.m003514Ricinus communis
28333.m000560Ricinus communis
NP_178241Arabidopsis thaliana
NP_849921Arabidopsis thaliana
NP_849922Arabidopsis thaliana
NP_973392Arabidopsis thaliana
e_gw1.255.7.1Physcomitrella patens subsp. patens
29932.m000597Ricinus communis
NP_001031843Arabidopsis thaliana
NP_190799Arabidopsis thaliana
NP_568169Arabidopsis thaliana
NP_850781Arabidopsis thaliana
NP_001061077Oryza sativa Japonica Group
27985.m000850Ricinus communis
29333.m001087Ricinus communis
150517Chlamydomonas reinhardtii
NP_001059813Oryza sativa Japonica Group
e_gw1.04.00.113.1Ostreococcus tauri
e_gw1.66.222.1Physcomitrella patens subsp. patens
1000010155Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS508930.0175447IPR003439ABC transporter-like
SMARTSM003821.2000011745813376E-10199433IPR003593ATPase, AAA+ type, core
PfamPF000051.7000000000000004E-4214374IPR003439ABC transporter-like
PfamPF010618.100000000000005E-29526737IPR013525ABC-2 type transporter
PfamPF083706.199999999999988E-21742805IPR013581Plant PDR ABC transporter associated
PROSITEPS508930.08501103IPR003439ABC transporter-like
SMARTSM003821.0999990912078718E-118871079IPR003593ATPase, AAA+ type, core
PfamPF000053.1000000000000026E-89021030IPR003439ABC transporter-like
PfamPF010611.2999999999999797E-4611761389IPR013525ABC-2 type transporter